The following dependencies are used but not declared in setup.py.
numpy
pandas
matplotlib
vtk
tqdm
skimage
sklearn
scipy
aicsimageio
aicsshparam
aicscytoparam
quilt3
datastep (still used in cvapipe_analysis/steps/validation/validation.py, cvapipe_analysis/steps/cellpack/cellpack.py)
joblib
This will cause problems for anyone who wants to pip install cvapipe_analysis and use a module with a missing dependency.
The following dependencies are used but not declared in
setup.py.This will cause problems for anyone who wants to
pip install cvapipe_analysisand use a module with a missing dependency.