diff --git a/.cspell.json b/.cspell.json index d98e5b5c..a6cb1f53 100644 --- a/.cspell.json +++ b/.cspell.json @@ -29,7 +29,6 @@ ".pre-commit-config.yaml", ".prettierignore", ".readthedocs.yml", - ".taplo.toml", ".vscode/*", "CITATION.cff", "codecov.yml", diff --git a/.github/workflows/benchmark.yml b/.github/workflows/benchmark.yml index 7c22754a..1e9d57e0 100644 --- a/.github/workflows/benchmark.yml +++ b/.github/workflows/benchmark.yml @@ -18,7 +18,7 @@ jobs: name: Performance regression runs-on: ubuntu-24.04 steps: - - uses: actions/checkout@v6 + - uses: actions/checkout@v7 with: fetch-depth: 0 - uses: actions/setup-python@v6 diff --git a/.github/workflows/redirect-gh-pages.yml b/.github/workflows/redirect-gh-pages.yml index 28a58c22..0bb73e33 100644 --- a/.github/workflows/redirect-gh-pages.yml +++ b/.github/workflows/redirect-gh-pages.yml @@ -26,7 +26,7 @@ jobs: ' > build/index.html - id: deployment - uses: actions/upload-pages-artifact@v4 + uses: actions/upload-pages-artifact@v5 with: path: build/ diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 6abe86f1..dd0a158a 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -4,6 +4,8 @@ ci: autoupdate_schedule: quarterly skip: - check-jsonschema + - tombi-format + - tombi-lint - ty - uv-lock @@ -14,23 +16,9 @@ repos: - id: check-useless-excludes - repo: https://github.com/ComPWA/policy - rev: 0.8.10 + rev: 0.9.0 hooks: - id: check-dev-files - args: - - --doc-apt-packages=graphviz - - --excluded-python-versions=3.14 - - --pytest-single-threaded - - --repo-name=tensorwaves - - --repo-title=TensorWaves - - --type-checker=ty - - id: colab-toc-visible - - id: fix-nbformat-version - - id: remove-empty-tags - - id: set-nb-cells - args: [--autolink-concat] - - id: set-nb-display-name - - id: strip-nb-whitespace - repo: https://github.com/kynan/nbstripout rev: 0.9.1 @@ -60,8 +48,19 @@ repos: metadata.varInspector metadata.vscode + - repo: https://github.com/ComPWA/nbhooks + rev: 0.0.1 + hooks: + - id: colab-toc-visible + - id: fix-nbformat-version + - id: remove-empty-tags + - id: set-nb-cells + args: [--autolink-concat] + - id: set-nb-display-name + - id: strip-nb-whitespace + - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.15.12 + rev: v0.15.21 hooks: - id: ruff-check args: [--fix] @@ -96,25 +95,20 @@ repos: )$ - id: trailing-whitespace + - repo: https://github.com/tombi-toml/tombi-pre-commit + rev: v1.2.0 + hooks: + - id: tombi-format + - id: tombi-lint + args: [--error-on-warnings] + - repo: https://github.com/ComPWA/prettier-pre-commit rev: v3.8.1 hooks: - id: prettier - - repo: https://github.com/ComPWA/taplo-pre-commit - rev: v0.9.3 - hooks: - - id: taplo-format - - - repo: https://github.com/pappasam/toml-sort - rev: v0.24.4 - hooks: - - id: toml-sort - args: - - --in-place - - repo: https://github.com/python-jsonschema/check-jsonschema - rev: 0.37.2 + rev: 0.37.4 hooks: - id: check-jsonschema name: Check CITATION.cff @@ -127,7 +121,7 @@ repos: pass_filenames: false - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v10.0.0 + rev: v10.0.1 hooks: - id: cspell language_version: 25.9.0 @@ -143,17 +137,13 @@ repos: .*\.py )$ - - repo: local + - repo: https://github.com/astral-sh/ty-pre-commit + rev: v0.0.59 hooks: - id: ty - name: ty - entry: ty check - args: [--no-progress, --output-format=concise] - require_serial: true - language: system - types_or: [python, pyi, jupyter] + args: [--group=types, --no-default-groups] - repo: https://github.com/astral-sh/uv-pre-commit - rev: 0.11.13 + rev: 0.11.29 hooks: - id: uv-lock diff --git a/.taplo.toml b/.taplo.toml deleted file mode 100644 index 8f9cb0fd..00000000 --- a/.taplo.toml +++ /dev/null @@ -1,19 +0,0 @@ -[formatting] -align_comments = false -align_entries = false -allowed_blank_lines = 1 -array_auto_collapse = false -array_auto_expand = true -array_trailing_comma = true -column_width = 88 -compact_inline_tables = true -indent_string = " " -reorder_arrays = true -reorder_keys = true - -[[rule]] -include = ["**/pyproject.toml"] -keys = ["tool.poe.tasks"] - -[rule.formatting] -reorder_arrays = false diff --git a/.vscode/extensions.json b/.vscode/extensions.json index feb6fed9..ea08bed5 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -19,7 +19,7 @@ "soulcode.vscode-unwanted-extensions", "stkb.rewrap", "streetsidesoftware.code-spell-checker", - "tamasfe.even-better-toml", + "tombi-toml.tombi", "yzhang.markdown-all-in-one" ], "unwantedRecommendations": [ @@ -34,6 +34,7 @@ "ms-python.vscode-pylance", "ms-toolsai.vscode-jupyter-slideshow", "ryanluker.vscode-coverage-gutters", + "tamasfe.even-better-toml", "travisillig.vscode-json-stable-stringify", "tyriar.sort-lines" ] diff --git a/.vscode/settings.json b/.vscode/settings.json index ba274c07..374f5fc6 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -23,6 +23,9 @@ "editor.defaultFormatter": "charliermarsh.ruff", "editor.rulers": [88] }, + "[toml]": { + "editor.defaultFormatter": "tombi-toml.tombi" + }, "[yaml]": { "editor.defaultFormatter": "esbenp.prettier-vscode" }, diff --git a/docs/conf.py b/docs/conf.py index a2038726..a0509130 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -45,7 +45,10 @@ def get_tensorflow_url() -> str: create_tensorflow_inventory() set_intersphinx_version_remapping({ "matplotlib": {"3.5.1": "3.5.0"}, - "pandas": {"3.0.2": "3.0.1"}, + "pandas": { + "3.0.2": "3.0.1", + "3.0.3": "3.0.1", + }, "scipy": {"1.7.3": "1.7.1"}, }) diff --git a/pyproject.toml b/pyproject.toml index 762ed193..4145ca1c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,77 +1,50 @@ -[build-system] -build-backend = "setuptools.build_meta" -requires = [ - "setuptools>=61.2", - "setuptools_scm", -] - [project] -authors = [{name = "Common Partial Wave Analysis", email = "compwa-admin@ep1.rub.de"}] +name = "tensorwaves" +description = "Python fitter package for multiple computational back-ends" +requires-python = ">=3.10" +license = "Apache-2.0" +license-files = ["LICENSE"] +authors = [{ name = "Common Partial Wave Analysis", email = "compwa-admin@ep1.rub.de" }] +maintainers = [{ email = "compwa-admin@ep1.rub.de" }] +keywords = [ + "HEP", + "PWA", + "amplitude analysis", + "partial wave analysis", + "particle physics", + "physics", + "tensorflow", +] classifiers = [ "Development Status :: 4 - Beta", "Intended Audience :: Developers", "Intended Audience :: Education", "Intended Audience :: Science/Research", - "License :: OSI Approved :: Apache Software License", "Natural Language :: English", "Operating System :: OS Independent", + "Programming Language :: Python", "Programming Language :: Python :: 3.10", "Programming Language :: Python :: 3.11", "Programming Language :: Python :: 3.12", "Programming Language :: Python :: 3.13", - "Programming Language :: Python", - "Topic :: Scientific/Engineering :: Physics", "Topic :: Scientific/Engineering", + "Topic :: Scientific/Engineering :: Physics", "Typing :: Typed", ] dependencies = [ - "PyYAML >=5.1", # https://stackoverflow.com/a/55171433 - "attrs >=20.1.0", # https://www.attrs.org/en/stable/api.html#next-gen + "PyYAML >=5.1", # https://stackoverflow.com/a/55171433 + "attrs >=20.1.0", # https://www.attrs.org/en/stable/api.html#next-gen "iminuit >=2.0", "numpy", "rich", - "sympy >=1.9", # lambdify cse - "tqdm >=4.24.0", # autonotebook + "sympy >=1.9", # lambdify cse + "tqdm >=4.24.0", # autonotebook ] -description = "Python fitter package for multiple computational back-ends" dynamic = ["version"] -keywords = [ - "HEP", - "PWA", - "amplitude analysis", - "partial wave analysis", - "particle physics", - "physics", - "tensorflow", -] -license = {file = "LICENSE"} -maintainers = [{email = "compwa-admin@ep1.rub.de"}] -name = "tensorwaves" -requires-python = ">=3.10" - -[project.optional-dependencies] -jax = [ - "jax", - "jaxlib", -] -numba = ["numba"] -phsp = [ - "phasespace[tf] >=1.7.0", - "tensorwaves[tf]", -] -pwa = [ - "ampform[viz]>=0.12.0", - "tensorwaves[phsp]", -] -scipy = ["scipy >=1"] -tf = [ - "tensorboard", - "tensorflow >=2.12", -] [project.readme] -content-type = "text/markdown" file = "README.md" +content-type = "text/markdown" [project.urls] Changelog = "https://github.com/ComPWA/tensorwaves/releases" @@ -79,13 +52,21 @@ Documentation = "https://tensorwaves.rtfd.io" Issues = "https://github.com/ComPWA/tensorwaves/issues" Source = "https://github.com/ComPWA/tensorwaves" +[project.optional-dependencies] +jax = ["jax", "jaxlib"] +numba = ["numba"] +phsp = ["phasespace[tf] >=1.7.0", "tensorwaves[tf]"] +pwa = ["ampform[viz]>=0.12.0", "tensorwaves[phsp]"] +scipy = ["scipy >=1"] +tf = ["tensorboard", "tensorflow >=2.12"] + [dependency-groups] dev = [ "ruff", - {include-group = "doc"}, - {include-group = "jupyter"}, - {include-group = "style"}, - {include-group = "test"}, + { include-group = "doc" }, + { include-group = "jupyter" }, + { include-group = "style" }, + { include-group = "test" }, ] doc = [ "myst-nb", @@ -99,7 +80,7 @@ doc = [ "sphinx-thebe", "sphinx-togglebutton", "sphobjinv", - {include-group = "notebooks"}, + { include-group = "notebooks" }, ] jupyter = [ "jupyter-ruff", @@ -110,7 +91,7 @@ jupyter = [ "jupyterlab-quickopen", "python-lsp-ruff", "python-lsp-server", - {include-group = "notebooks"}, + { include-group = "notebooks" }, ] notebooks = [ "black", @@ -122,17 +103,17 @@ notebooks = [ ] style = [ "ty", - {include-group = "notebooks"}, - {include-group = "types"}, + { include-group = "notebooks" }, + { include-group = "types" }, ] test = [ "pyarrow", "pytest-benchmark", "pytest-cov", - {include-group = "test-types"}, + { include-group = "test-types" }, ] test-types = [ - "ipython", # test _repr_pretty_ + "ipython", # test _repr_pretty_ "pytest", "pytest-mock", ] @@ -144,27 +125,29 @@ types = [ "types-requests", "types-tensorflow", "types-tqdm", - {include-group = "test-types"}, + { include-group = "notebooks" }, + { include-group = "test-types" }, ] -[tool.setuptools] -include-package-data = false -package-dir = {"" = "src"} +[build-system] +requires = [ + "setuptools>=61.2", + "setuptools_scm", +] +build-backend = "setuptools.build_meta" -[tool.setuptools.package-data] -tensorwaves = ["py.typed"] +[tool.compwa.policy] +doc-apt-packages = "graphviz" +pytest-single-threaded = true +repo-name = "tensorwaves" +repo-title = "TensorWaves" -[tool.setuptools.packages.find] -namespaces = false -where = ["src"] - -[tool.setuptools_scm] -write_to = "src/tensorwaves/version.py" +[tool.compwa.policy.python] +excluded-python-versions = "3.14" +type-checker = ["ty"] [tool.coverage.report] -exclude_also = [ - "if TYPE_CHECKING:", -] +exclude_also = ["if TYPE_CHECKING:"] [tool.coverage.run] branch = true @@ -182,48 +165,10 @@ isolated = true no-group = "dev" type = "uv" -[tool.poe.tasks.all] -help = "Run all continuous integration (CI) tasks locally" -ignore_fail = "return_non_zero" -sequence = [ - "benchmark", - "cov", - "docnb-force", - "linkcheck", - "style", - "test-all", -] - -[tool.poe.tasks.benchmark] -cmd = """ -pytest benchmarks \ - --benchmark-autosave \ - --benchmark-json benchmarks/output.json \ - --durations=0 \ - -k benchmark -""" -executor = {extra = ["jax", "numba", "pwa"], group = "test"} -help = "Run benchmark tests and visualize performance" - -[tool.poe.tasks.cov] -cmd = """ -pytest \ - --cov=tensorwaves \ - --cov-fail-under=85 \ - --cov-report=html \ - --cov-report=xml \ - ${paths} -""" -executor = {extra = ["jax", "numba", "pwa"], group = "test"} -help = "Compute how much of the source code is covered by tests" - -[[tool.poe.tasks.cov.args]] -default = "" -multiple = true -name = "paths" -positional = true +[tool.poe.groups.doc] +heading = "Documentation" -[tool.poe.tasks.doc] +[tool.poe.groups.doc.tasks.doc] cmd = """ sphinx-build \ --builder=html \ @@ -233,11 +178,11 @@ sphinx-build \ docs/ \ docs/_build/html/ """ -env = {PYTHONWARNINGS = ""} -executor = {group = "doc"} +env = { PYTHONWARNINGS = "" } +executor = { group = "doc" } help = "Build documentation and API" -[tool.poe.tasks.doclive] +[tool.poe.groups.doc.tasks.doclive] cmd = """ sphinx-autobuild \ --builder=html \ @@ -272,25 +217,84 @@ sphinx-autobuild \ docs/ \ docs/_build/html/ """ -executor = {group = "doc", with = "sphinx-autobuild"} +executor = { group = "doc", with = "sphinx-autobuild" } help = "Set up a server to directly preview changes to the HTML pages" -[tool.poe.tasks.docnb] -env = {EXECUTE_NB = "yes"} +[tool.poe.groups.doc.tasks.docnb] +env = { EXECUTE_NB = "yes" } help = "Build documentation and API with cached notebook execution" sequence = ["doc"] -[tool.poe.tasks.docnb-force] -env = {FORCE_EXECUTE_NB = "yes"} +[tool.poe.groups.doc.tasks.docnb-force] +env = { FORCE_EXECUTE_NB = "yes" } help = "Build documentation and API with notebook execution (no cache)" sequence = ["doc"] -[tool.poe.tasks.docnblive] -env = {EXECUTE_NB = "yes"} +[tool.poe.groups.doc.tasks.docnblive] +env = { EXECUTE_NB = "yes" } help = "Set up a server to directly preview changes to the HTML pages with cached notebook execution" sequence = ["doclive"] -[tool.poe.tasks.jax] +[tool.poe.groups.doc.tasks.linkcheck] +cmd = """ +sphinx-build \ + --builder=linkcheck \ + --show-traceback \ + docs/ \ + docs/_build/linkcheck/ +""" +env = { PYTHONWARNINGS = "" } +executor = { group = "doc" } +help = "Check external links in the documentation (requires internet connection)" + +[tool.poe.groups.notebook] +heading = "Notebooks" + +[tool.poe.groups.notebook.tasks.lab] +args = [{ name = "paths", default = "", positional = true }] +cmd = "jupyter lab ${paths}" +executor = { group = "jupyter" } +help = "Launch Jupyter Lab" + +[tool.poe.groups.notebook.tasks.nb] +args = [{ name = "paths", default = "docs", multiple = true, positional = true }] +cmd = "pytest --nbmake --nbmake-timeout=0 ${paths}" +executor = { group = "notebooks", with = "nbmake" } +help = "Run all notebooks" + +[tool.poe.groups.test] +heading = "Testing" + +[tool.poe.groups.test.tasks.benchmark] +cmd = """ +pytest benchmarks \ + --benchmark-autosave \ + --benchmark-json benchmarks/output.json \ + --durations=0 \ + -k benchmark +""" +executor = { extra = ["jax", "numba", "pwa"], group = "test" } +help = "Run benchmark tests and visualize performance" + +[tool.poe.groups.test.tasks.cov] +cmd = """ +pytest \ + --cov=tensorwaves \ + --cov-fail-under=85 \ + --cov-report=html \ + --cov-report=xml \ + ${paths} +""" +executor = { extra = ["jax", "numba", "pwa"], group = "test" } +help = "Compute how much of the source code is covered by tests" + +[[tool.poe.groups.test.tasks.cov.args]] +default = "" +multiple = true +name = "paths" +positional = true + +[tool.poe.groups.test.tasks.jax] cmd = """ pytest \ -k 'benchmark or not benchmark' \ @@ -298,93 +302,87 @@ pytest \ --benchmark-disable \ ${paths} """ -executor = {extra = "jax", group = "test"} +executor = { extra = "jax", group = "test" } help = "Run tests with JAX only" -[[tool.poe.tasks.jax.args]] +[[tool.poe.groups.test.tasks.jax.args]] default = "src tests" multiple = true name = "paths" positional = true -[tool.poe.tasks.lab] -args = [{name = "paths", default = "", positional = true}] -cmd = "jupyter lab ${paths}" -executor = {group = "jupyter"} -help = "Launch Jupyter Lab" - -[tool.poe.tasks.linkcheck] -cmd = """ -sphinx-build \ - --builder=linkcheck \ - --show-traceback \ - docs/ \ - docs/_build/linkcheck/ -""" -env = {PYTHONWARNINGS = ""} -executor = {group = "doc"} -help = "Check external links in the documentation (requires internet connection)" - -[tool.poe.tasks.nb] -args = [{name = "paths", default = "docs", multiple = true, positional = true}] -cmd = "pytest --nbmake --nbmake-timeout=0 ${paths}" -executor = {group = "notebooks", with = "nbmake"} -help = "Run all notebooks" - -[tool.poe.tasks.style] -cmd = "pre-commit run --all-files" -executor = {group = "style"} -help = "Perform all linting, formatting, and spelling checks" - -[tool.poe.tasks.test] +[tool.poe.groups.test.tasks.test] cmd = "pytest --benchmark-disable -m 'slow or not slow' ${paths}" -executor = {extra = ["jax", "numba", "pwa"], group = "test"} +executor = { extra = ["jax", "numba", "pwa"], group = "test" } help = "Run all unit tests" -[[tool.poe.tasks.test.args]] +[[tool.poe.groups.test.tasks.test.args]] default = "src tests" multiple = true name = "paths" positional = true -[tool.poe.tasks.test-all] +[tool.poe.groups.test.tasks.test-all] help = "Run all tests on each supported Python version" sequence = [ - {ref = "test-py310 ${paths}"}, - {ref = "test-py311 ${paths}"}, - {ref = "test-py312 ${paths}"}, - {ref = "test-py313 ${paths}"}, + "test-py310 ${paths}", + "test-py311 ${paths}", + "test-py312 ${paths}", + "test-py313 ${paths}", ] -[[tool.poe.tasks.test-all.args]] +[[tool.poe.groups.test.tasks.test-all.args]] default = "" multiple = true name = "paths" positional = true -[tool.poe.tasks.test-py310] -env = {UV_PYTHON = "3.10"} +[tool.poe.groups.test.tasks.test-py310] +env = { UV_PYTHON = "3.10" } ref = "test" -[tool.poe.tasks.test-py311] -env = {UV_PYTHON = "3.11"} +[tool.poe.groups.test.tasks.test-py311] +env = { UV_PYTHON = "3.11" } ref = "test" -[tool.poe.tasks.test-py312] -env = {UV_PYTHON = "3.12"} +[tool.poe.groups.test.tasks.test-py312] +env = { UV_PYTHON = "3.12" } ref = "test" -[tool.poe.tasks.test-py313] -env = {UV_PYTHON = "3.13"} +[tool.poe.groups.test.tasks.test-py313] +env = { UV_PYTHON = "3.13" } ref = "test" -[tool.poe.tasks.upgrade] -executor = {type = "simple"} -parallel = [ - {cmd = "pre-commit autoupdate -j8"}, - {cmd = "uv lock --upgrade"}, +[tool.poe.tasks.all] +help = "Run all continuous integration (CI) tasks locally" +ignore_fail = "return_non_zero" +sequence = [ + "style", + "linkcheck", + "cov", + "benchmark", + "docnb-force", + "test-all", ] +[tool.poe.tasks.style] +cmd = "pre-commit run --all-files" +executor = { group = "style" } +help = "Perform all linting, formatting, and spelling checks" + +[tool.poe.tasks.upgrade] +executor = { type = "simple" } +help = "Upgrade lock files" +parallel = ["_upgrade-precommit", "_upgrade-uv"] + +[tool.poe.tasks._upgrade-precommit] +cmd = "pre-commit autoupdate -j8" +executor = { type = "simple" } + +[tool.poe.tasks._upgrade-uv] +cmd = "uv lock --upgrade" +executor = { type = "simple" } + [tool.pytest] addopts = [ "--color=yes", @@ -439,10 +437,7 @@ extend-exclude = ["typings"] extend-include = ["*.ipynb"] preview = true show-fixes = true -src = [ - "src", - "tests", -] +src = ["src", "tests"] [tool.ruff.format] docstring-code-format = true @@ -483,7 +478,7 @@ select = ["ALL"] task-tags = ["cspell"] [tool.ruff.lint.flake8-builtins] -builtins-ignorelist = ["display"] +ignorelist = ["display"] [tool.ruff.lint.flake8-comprehensions] allow-dict-calls-with-keyword-arguments = true @@ -583,18 +578,34 @@ allow-dunder-method-names = [ "_repr_pretty_", ] -[tool.tomlsort] -all = false -ignore_case = true -in_place = true -sort_first = [ - "build-system", - "project", - "tool.setuptools", - "tool.setuptools_scm", -] -spaces_indent_inline_array = 4 -trailing_comma_inline_array = true +[tool.setuptools] +include-package-data = false +package-dir = { "" = "src" } + +[tool.setuptools.package-data] +tensorwaves = ["py.typed"] + +[tool.setuptools.packages.find] +namespaces = false +where = ["src"] + +[tool.setuptools_scm] +version_file = "src/tensorwaves/version.py" + +[tool.tombi.files] +exclude = ["**/uv.lock"] + +[tool.tombi.format.rules] +indent-width = 4 +line-width = 88 + +[tool.tombi.lint.rules] +key-empty = "off" + +[[tool.tombi.schemas]] +root = "tool.compwa.policy" +path = "https://raw.githubusercontent.com/ComPWA/policy/0.9.0/compwa-policy.schema.json" +include = ["pyproject.toml"] [[tool.ty.overrides]] include = [ diff --git a/src/tensorwaves/data/transform.py b/src/tensorwaves/data/transform.py index c98d6915..aae2b7ab 100644 --- a/src/tensorwaves/data/transform.py +++ b/src/tensorwaves/data/transform.py @@ -96,7 +96,7 @@ def from_sympy( for variable_name, expr in expanded_expressions.items(): function = _lambdify_normal_or_fast( expr, - ordered_symbols, # ty:ignore[invalid-argument-type] + ordered_symbols, backend, use_cse=use_cse, use_jit=use_jit, diff --git a/src/tensorwaves/function/_backend.py b/src/tensorwaves/function/_backend.py index c25aa553..3d74f953 100644 --- a/src/tensorwaves/function/_backend.py +++ b/src/tensorwaves/function/_backend.py @@ -72,10 +72,10 @@ def get_jit_compile_dectorator( backends_supporting_jit = {"jax", "numba"} if backend.lower() in backends_supporting_jit: return jit_compile(backend) - return lambda x: x + return _do_not_compile if use_jit: return jit_compile(backend) - return lambda x: x + return _do_not_compile def jit_compile(backend: str) -> Callable[[Callable[P, T]], Callable[P, T]]: @@ -96,7 +96,11 @@ def jit_compile(backend: str) -> Callable[[Callable[P, T]], Callable[P, T]]: msg = f"Backend {backend} does not yet support JIT compilation" warn(msg, category=UserWarning, stacklevel=3) - return lambda x: x + return _do_not_compile + + +def _do_not_compile(function: Callable[P, T]) -> Callable[P, T]: + return function def raise_missing_module_error(module_name: str, *, extras_require: str = "") -> None: diff --git a/src/tensorwaves/function/sympy/__init__.py b/src/tensorwaves/function/sympy/__init__.py index c27d4714..92e10f67 100644 --- a/src/tensorwaves/function/sympy/__init__.py +++ b/src/tensorwaves/function/sympy/__init__.py @@ -67,7 +67,7 @@ def create_function( sorted_symbols = sorted(free_symbols, key=str) lambdified_function = _lambdify_normal_or_fast( expression=expression, - symbols=sorted_symbols, # ty:ignore[invalid-argument-type] + symbols=sorted_symbols, backend=backend, use_cse=use_cse, use_jit=use_jit, @@ -130,7 +130,7 @@ def create_parametrized_function( # noqa: PLR0913 sorted_symbols = tuple(data_symbols + parameter_symbols) # for partial+gradient lambdified_function = _lambdify_normal_or_fast( expression=expression, - symbols=sorted_symbols, # ty:ignore[invalid-argument-type] + symbols=sorted_symbols, backend=backend, use_cse=use_cse, use_jit=use_jit, @@ -359,7 +359,7 @@ def fast_lambdify( # noqa: PLR0913 sorted_top_symbols = sorted(sub_expressions, key=str) top_function = lambdify( top_expression, - sorted_top_symbols, # ty:ignore[invalid-argument-type] + sorted_top_symbols, backend, use_cse=use_cse, use_jit=use_jit, @@ -371,7 +371,7 @@ def fast_lambdify( # noqa: PLR0913 unit="expr", disable=not _use_progress_bar(), ): - sub_expression = sub_expressions[symbol] # ty:ignore[invalid-argument-type] + sub_expression = sub_expressions[symbol] sub_function = lambdify( sub_expression, symbols, backend, use_cse=use_cse, use_jit=use_jit ) @@ -528,7 +528,7 @@ def prepare_caching( undefined_variables.update(variables - _get_free_symbols(sub_expr)) for symbol in undefined_variables: transformer_expressions[symbol] = symbol # noqa: PERF403 - return cache_expression, transformer_expressions + return cache_expression, transformer_expressions # ty:ignore[invalid-return-type] def split_expression( diff --git a/src/tensorwaves/interface.py b/src/tensorwaves/interface.py index e91a8e49..eb12a2c1 100644 --- a/src/tensorwaves/interface.py +++ b/src/tensorwaves/interface.py @@ -58,7 +58,7 @@ class ParametrizedFunction(Function[InputType, OutputType]): @property @abstractmethod def parameters(self) -> dict[str, ParameterValue]: - """Get `dict` of parameters.""" + """`dict` of parameters.""" @abstractmethod def update_parameters(self, new_parameters: Mapping[str, ParameterValue]) -> None: @@ -213,10 +213,7 @@ def __call__( @property @abstractmethod def seed(self) -> int | None: - """Get random seed. - - `None` if you want indeterministic behavior. - """ + """Random seed; `None` if you want indeterministic behavior.""" @seed.setter @abstractmethod diff --git a/tests/function/test_sympy.py b/tests/function/test_sympy.py index 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