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kmeansKOMSM.m
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164 lines (139 loc) · 4.21 KB
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classdef kmeansKOMSM
properties (SetAccess = public)
nDim;
nNum1;
nClass;
nSubDim1;
nOrthDim;
nSigma;
nAlpha;
X1;
A1;
B1;
E1;
C1;
Lc;
D;
O;
W;
useRFF;
numRandFeats;
end% properties
methods
function OB = kmeansKOMSM(X1,Lc,nSubDim1,nSigma,varargin)
% if nargin == 5
% OB.nAlpha = 0.999;
% else
% OB.nAlpha = varargin{1};
% end
useRFF = false;
if nargin > 4 && strcmp(varargin{1},'RFF') && isnumeric(varargin{2})
useRFF = true;
numRandFeats = varargin{2};
end
OB.nAlpha = 0.999;
if useRFF
OB.numRandFeats = numRandFeats;
end
OB.nSubDim1 = nSubDim1;
OB.nSigma = nSigma;
OB.Lc = Lc;
OB.X1 = X1;
OB.useRFF = useRFF;
[OB.nDim , OB.nNum1, OB.nClass] = size(X1);
OB.A1 = zeros(OB.nNum1,OB.nSubDim1,OB.nClass);
OB.B1 = zeros(OB.nNum1,OB.nSubDim1,OB.nClass);
OB.E1 = zeros(OB.nSubDim1,OB.nClass);
OB.C1 = zeros(1,OB.nClass);
for I=1:OB.nClass
if OB.useRFF
OB.A1(:,:,I) = kmeansKPCA(OB.X1(:,:,I),OB.Lc(I,:),OB.nSubDim1,OB.nSigma,...
'RFF', OB.numRandFeats);
else
OB.A1(:,:,I) = kmeansKPCA(OB.X1(:,:,I),OB.Lc(I,:),OB.nSubDim1,OB.nSigma);
end
end
OB.D = zeros(OB.nSubDim1, OB.nSubDim1, OB.nClass,OB.nClass);
for I1 = 1:OB.nClass
for I2 = I1:OB.nClass
% if useRFF
% K = cvtKernelGramMatrix(OB.X1(:, :, I1), OB.X1(:, :, I2), OB.numRandFeats, nSigma);
% else
% K = cvtKernelGramMatrix(OB.X1(:, :, I1), OB.X1(:, :, I2), nSigma);
% end
K = cvtKernelGramMatrix(X1(:, :, I1), X1(:, :, I2), nSigma);
K = diag(sqrt(OB.Lc(I1,:)))*K*diag(sqrt(OB.Lc(I2,:)));
if I1 == I2
OB.D(:,:,I1,I2) = eye(OB.nSubDim1,OB.nSubDim1);
else
OB.D(:,:,I1,I2) = OB.A1(:,:,I1)'*K* OB.A1(:,:,I2);
OB.D(:,:,I2,I1) = OB.D(:,:,I1,I2)';
end
end
end
OB.D = reshape(permute(OB.D,[1,3,2,4]), OB.nSubDim1 * OB.nClass, OB.nSubDim1 * OB.nClass);
if numel(find(isinf(OB.D)))
fprintf('Error: OB.D includes Inf or NaN\n');
return
end
[B,OB.W] = svd(OB.D);
OB.W=diag(OB.W/trace(OB.W));
OB.nOrthDim = find(cumsum(OB.W)/sum(OB.W)>=OB.nAlpha, 1 );
B=B(:,1:OB.nOrthDim);
OB.W = OB.W(1:OB.nOrthDim);
OB.O = diag(1./(OB.W))*B';
for I1 = 1:OB.nClass
OB.B1(:,:,I1) = diag(sqrt(OB.Lc(I1,:)))*OB.A1(:,:,I1);
end
end
function [V2 E2 C2 A2 ] = TransformS(OB, X2,nSubDim2)
nSize = size(X2);
X2=X2(:,:,:);
[tmp, nNum2,nSet2] = size(X2);
A2 = zeros(nNum2,nSubDim2,nSet2);
E2 = zeros(nSubDim2,nSet2);
C2 = zeros(1,nSet2);
for I=1:nSet2
[A2(:,:,I) E2(:,I) C2(I)] = orzKPCA(X2(:,:,I),nSubDim2,OB.nSigma,'R');
end
V2 = zeros(OB.nOrthDim,nSubDim2,nSet2);
for J = 1:nSet2
a = zeros( OB.nSubDim1, nNum2,OB.nClass);
for I = 1:OB.nClass
Z = cvtKernelGramMatrix(OB.X1(:, : ,I), X2(:, :, J), OB.nSigma);
a(:,:,I) = OB.A1(:,:,I)' * Z;
end
a = permute(a,[1,3,2]);
a = reshape(a,size(a,1)*size(a,2),size(a,3));
V2(:,:,J) = cvtGramSchmidt(OB.O*a*A2(:,:,J));
end
V2 = reshape(V2,[OB.nOrthDim,nSubDim2,nSize(3:end),1]);
end
function [Y2] = Transform(OB, X2)
% ƒpƒ^[ƒ�?ƒxƒNƒgƒ�?‚É�?Î�?·‚é’¼Œð‰»•Ï�?�‚¾‚¯
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nSize = size(X2);
X2=X2(:,:,:);
[tmp nNum2,nSet2] = size(X2);
Y2 = zeros(OB.nOrthDim,nNum2,nSet2);
for J=1:nSet2
a = zeros( OB.nSubDim1,nNum2,OB.nClass);
for I = 1:OB.nClass
if OB.useRFF
Z = cvtKernelGramMatrix(OB.X1(:, :, I), X2(:, :, J), OB.numRandFeats, OB.nSigma);
else
Z = cvtKernelGramMatrix(OB.X1(:, :, I), X2(:, :, J), OB.nSigma);
end
% Z = cvtKernelGramMatrix(OB.X1(:, :, I), X2(:, :, J), OB.nSigma);
%Z = diag(sqrt(OB.Lc(I,:)))*Z;
%a(:,:,I) = OB.A1(:,:,I)' * Z;
a(:,:,I) = OB.B1(:,:,I)' * Z;
end
a = permute(a,[1,3,2]);
a = reshape(a,OB.nSubDim1*OB.nClass,nNum2);
Y2(:,:,J) = OB.O*a;
end
Y2 = reshape(Y2,[OB.nOrthDim,nNum2,nSize(3:end),1]);
end
end% methods
end% classdef