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Fix pnpm member settings written to an ignored nested pnpm-workspace.yaml (#880, #881) #1950

Job	Run time
test-release	26m 23s
e2e-build (macos-latest)	5m 8s
coverage	5m 33s
lint-ecosystems	16m 44s
e2e-build (ubuntu-latest)	3m 38s
e2e-build (windows-latest)	15m 37s
clippy	16m 19s
dispatch-tests	11s
release-readiness	17m 0s
node-addon	15m 58s
test (macos-latest)	35m 34s
hosted-e2e	17m 3s
docker-base	5m 44s
test (windows-latest)	24m 30s
coverage-docker (pypi)	6m 51s
coverage-docker (npm)	23m 35s
coverage-docker (deno)	6m 5s
coverage-docker (composer)	6m 3s
coverage-docker (golang)	6m 0s
coverage-docker (maven)	6m 51s
coverage-docker (gem)	6m 22s
coverage-docker (cargo)	6m 12s
coverage-docker (nuget)	6m 33s
e2e-docker	-1s
e2e	0s
e2e-full	1s
yarn-berry ${{ matrix.yarn }} (${{ matrix.os }})	1s
yarn-classic ${{ matrix.release }}	1s
cargo ${{ matrix.toolchain }} lock-v${{ (matrix.lock \|\| 'own') }} (${{ matrix.os }})	1s
yarn-berry ${{ matrix.yarn }} (${{ matrix.os }})	1s
cargo old toolchains (manifest [patch])	1s
cargo ${{ matrix.toolchain }} lock-v${{ (matrix.lock \|\| 'own') }} (${{ matrix.os }})	1s
coverage-merge	1s
	4h 40m 1s