_setup.Rmd

```{r setup, include=FALSE}

suppressPackageStartupMessages({

    Require <- function(pkg){
        pkg <- as.character(substitute(pkg))
        if(!require(pkg, character.only=TRUE)){
            require("BiocManager")
            BiocManager::install(pkg)
        }
        require(pkg, character.only=TRUE)
    }

    if(!require(BiocManager)) {
        require(BiocManager)
    }

    if(!require(DNAmArray)) {
        require(DNAmArray)
    }

    Require(BiocParallel)
    Require(knitr)

})

opts_chunk$set(cache = TRUE, eval = TRUE,
               cache.lazy = FALSE) ##see http://stackoverflow.com/questions/39417003/long-vectors-not-supported-yet-error-in-rmd-but-not-in-r-script

knitr::opts_knit$set(root.dir = "/data/sinkelj1/DNAmArray/")
```