scANTIPODE/pyproject.toml at main · mtvector/scANTIPODE · GitHub

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[build-system]
requires = [
    "setuptools>=42",
    "wheel"
]
build-backend = "setuptools.build_meta"

[project]
name = "antipode"
version = "0.2.0"
description = "Simultaneous integration, differential expression and clustering of single cell RNAseq data using pyro-powered variational inference."
readme = { file = "README.md", "content-type" = "text/markdown" }
requires-python = ">=3.10"

classifiers = [
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering :: Bio-Informatics"
]

authors = [
  { name = "Matthew Schmitz" }
]

dependencies = [
    "scanpy",
    "scvi-tools",
    "pyro-ppl",
    "seaborn",
    "scikit-learn",
    "legacy-cgi",
    "ete3",
    "glasbey"
]

[project.optional-dependencies]
extras = ["biopython", "gseapy", "PyComplexHeatmap", "glasbey"]
# rapids = [
#     "cudf-cu12",
#     "pylibcudf-cu12",
#     "cuml-cu12",
#     "cupy-cuda12"

[project.urls]
"Source" = "https://github.com/mtvector/scANTIPODE"

[tool.setuptools]
packages = { find = {} }

# [tool.setuptools.packages.find]
# exclude = ["tests*"]