STY: black [ignore-rev]

Author: effigies

nipype/algorithms/misc.py

@@ -968,7 +968,6 @@ class CalculateNormalizedMoments(BaseInterface):
     output_spec = CalculateNormalizedMomentsOutputSpec
 
     def _run_interface(self, runtime):
-
         self._moments = calc_moments(self.inputs.timeseries_file, self.inputs.moment)
         return runtime
 

nipype/algorithms/tests/test_ErrorMap.py

@@ -10,7 +10,6 @@
 
 
 def test_errormap(tmpdir):
-
     # Single-Spectual
     # Make two fake 2*2*2 voxel volumes
     # John von Neumann's birthday

nipype/algorithms/tests/test_misc.py

@@ -13,7 +13,6 @@
 
 
 def test_CreateNifti(create_analyze_pair_file_in_directory):
-
     filelist, outdir = create_analyze_pair_file_in_directory
 
     create_nifti = misc.CreateNifti()
@@ -35,7 +34,6 @@ def test_CreateNifti(create_analyze_pair_file_in_directory):
 
 
 def test_CalculateMedian(create_analyze_pair_file_in_directory):
-
     mean = misc.CalculateMedian()
 
     with pytest.raises(TypeError):

nipype/algorithms/tests/test_normalize_tpms.py

@@ -16,7 +16,6 @@
 
 
 def test_normalize_tpms(tmpdir):
-
     in_mask = example_data("tpms_msk.nii.gz")
     mskdata = np.asanyarray(nb.load(in_mask).dataobj)
     mskdata[mskdata > 0.0] = 1.0

nipype/conftest.py

@@ -27,7 +27,6 @@ def _docdir(request):
     # Trigger ONLY for the doctests.
     doctest_plugin = request.config.pluginmanager.getplugin("doctest")
     if isinstance(request.node, doctest_plugin.DoctestItem):
-
         # Get the fixture dynamically by its name.
         tmpdir = pp.local(data_dir)
 

nipype/external/cloghandler.py

@@ -151,7 +151,9 @@ def __init__(
                 )
         try:
             BaseRotatingHandler.__init__(self, filename, mode, encoding)
-        except TypeError:  # Due to a different logging release without encoding support  (Python 2.4.1 and earlier?)
+        except (
+            TypeError
+        ):  # Due to a different logging release without encoding support  (Python 2.4.1 and earlier?)
             BaseRotatingHandler.__init__(self, filename, mode)
             self.encoding = encoding
 

nipype/interfaces/afni/preprocess.py

@@ -1133,7 +1133,6 @@ class ClipLevel(AFNICommandBase):
     output_spec = ClipLevelOutputSpec
 
     def aggregate_outputs(self, runtime=None, needed_outputs=None):
-
         outputs = self._outputs()
 
         outfile = os.path.join(os.getcwd(), "stat_result.json")
@@ -2295,7 +2294,6 @@ class Seg(AFNICommandBase):
     output_spec = AFNICommandOutputSpec
 
     def aggregate_outputs(self, runtime=None, needed_outputs=None):
-
         import glob
 
         outputs = self._outputs()

nipype/interfaces/afni/utils.py

@@ -302,7 +302,6 @@ class BrickStat(AFNICommandBase):
     output_spec = BrickStatOutputSpec
 
     def aggregate_outputs(self, runtime=None, needed_outputs=None):
-
         outputs = self._outputs()
 
         outfile = os.path.join(os.getcwd(), "stat_result.json")
@@ -2595,7 +2594,6 @@ def _format_arg(self, name, spec, value):
 
 
 class ResampleInputSpec(AFNICommandInputSpec):
-
     in_file = File(
         desc="input file to 3dresample",
         argstr="-inset %s",

nipype/interfaces/base/core.py

@@ -389,7 +389,6 @@ def run(self, cwd=None, ignore_exception=None, **inputs):
         self._check_version_requirements(self.inputs)
 
         with rtc(self, cwd=cwd, redirect_x=self._redirect_x) as runtime:
-
             # Grab inputs now, as they should not change during execution
             inputs = self.inputs.get_traitsfree()
             outputs = None

nipype/interfaces/base/traits_extension.py

@@ -405,7 +405,6 @@ class MultiObject(traits.List):
     """Abstract class - shared functionality of input and output MultiObject"""
 
     def validate(self, objekt, name, value):
-
         # want to treat range and other sequences (except str) as list
         if not isinstance(value, (str, bytes)) and isinstance(value, Sequence):
             value = list(value)