diff --git a/.cruft.json b/.cruft.json
index c327085..8564f57 100644
--- a/.cruft.json
+++ b/.cruft.json
@@ -1,6 +1,6 @@
 {
   "template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-  "commit": "fb52a58935c87d1289c43822fe0814abe56c9071",
+  "commit": "bbeefa8a3730394de7b4c67fde8cfbe477316166",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -36,7 +36,7 @@
         "trim_blocks": true
       },
       "_template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-      "_commit": "fb52a58935c87d1289c43822fe0814abe56c9071"
+      "_commit": "bbeefa8a3730394de7b4c67fde8cfbe477316166"
     }
   },
   "directory": null
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 118cb1b..401c82b 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -7,16 +7,16 @@ default_stages:
 minimum_pre_commit_version: 2.16.0
 repos:
   - repo: https://github.com/biomejs/pre-commit
-    rev: v2.4.9
+    rev: v2.4.10
     hooks:
       - id: biome-format
         exclude: ^\.cruft\.json$ # inconsistent indentation with cruft - file never to be modified manually.
   - repo: https://github.com/tox-dev/pyproject-fmt
-    rev: v2.20.0
+    rev: v2.21.0
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.8
+    rev: v0.15.9
     hooks:
       - id: ruff-check
         types_or: [python, pyi, jupyter]