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perf: more efficient _sparse_nanmean

Status: Open (in progress).

scverse/scanpynumber 3570

#3570 In scverse/scanpy;

· Reovirus opened on Apr 8, 2025

docs: add inline example of pca_variance_ratio

Status: Open (in progress).

scverse/scanpynumber 3950

#3950 In scverse/scanpy;

· marvinbuff opened on Jan 22, 2026

fix: regress_out for more threads than 64

Status: Open (in progress).

scverse/scanpynumber 3954

#3954 In scverse/scanpy;

· Intron7 opened on Jan 26, 2026

perf: "two-pass" seurat hvg via scanpy.get.aggregate

benchmark

Status: Draft (not ready).

scverse/scanpynumber 4013

#4013 In scverse/scanpy;

· ilan-gold opened on Mar 26, 2026

perf: Combat perf improvements

Status: Open (in progress).

scverse/scanpynumber 4070

#4070 In scverse/scanpy;

· ilaykav opened on Apr 17, 2026

docs: clarify method vs transformer in sc.pp.neighbors

Status: Open (in progress).

scverse/scanpynumber 4079

#4079 In scverse/scanpy;

· CuiweiG opened on Apr 21, 2026