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goProfiles
goProfiles Publican R/Bioconductor package for the statistical analysis of functional profiles
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EquivalenceAnalysisOfGeneLists
EquivalenceAnalysisOfGeneLists PublicSupplementary materials for the paper "Equivalence Analysis of Gene Lists"
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Selecting_GRM
Selecting_GRM PublicSelection of genes with L pattern in the expression-methylation scatterplot, potentially regulated by methylation.
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equivStandardTest
equivStandardTest PublicImplements a naĂŻve version af an equivalence test between two lists. For research purposes, not for applications!
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Lheuristic-Examples
Lheuristic-Examples PublicThis repository contains examples and applications of analyses done using the Lheuristic package
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Repositories
- localEnrichment Public
Functions to perform Enrichment Analysis (ORA, XSEA by now) using local collections of sets
- TFM_MDD_framework Public Forked from jvaldiviaga/TFM_MDD_framework
This work, developed by Jessica Valdivia GarcĂa provides a nice example on how to build an automated framework. It is part of her MSc Thesis: "Desarrollo de un Framework Automatizado y MultiĂłmico para la IdentificaciĂłn de Biomarcadores Funcionales y Moleculares en DepresiĂłn Mayor"
- Lheuristic Public
New version of the Lheuristic package that uses `MultiAssayExperiment`class to manage expression and methylation data
- Lheuristic0 Public
- Selecting_GRM Public
Selection of genes with L pattern in the expression-methylation scatterplot, potentially regulated by methylation.
- Lheuristic-Examples Public
This repository contains examples and applications of analyses done using the Lheuristic package
- FoodBiomarkerOntology Public Forked from pcastellanoescuder/FoodBiomarkerOntology
🚀 Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology
- equivStandardTest Public
Implements a naĂŻve version af an equivalence test between two lists. For research purposes, not for applications!
- goProfilesApp Public Forked from xevialarconmasferrer/goProfiles-RShiny-App
This application implements the package goProfiles to compare lists of genes based on their functional profiles.
- EquivalenceAnalysisOfGeneLists Public
Supplementary materials for the paper "Equivalence Analysis of Gene Lists"
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