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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 397 163

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 26 16

Repositories

Showing 10 of 510 repositories
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES's past year of commit activity
    IGOR Pro 29 11 285 5 Updated Sep 9, 2026
  • ac_segmentation Public
    AllenInstitute/ac_segmentation's past year of commit activity
    Python 0 GPL-3.0 0 1 0 Updated Sep 9, 2026
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis's past year of commit activity
    TypeScript 10 BSD-3-Clause 1 14 11 Updated Sep 9, 2026
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder's past year of commit activity
    TypeScript 21 BSD-3-Clause 10 64 12 Updated Sep 9, 2026
  • HMBA_WB_Atlas Public
    AllenInstitute/HMBA_WB_Atlas's past year of commit activity
    HTML 0 0 17 0 Updated Sep 9, 2026
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    AllenInstitute/neuroglancer's past year of commit activity
    TypeScript 0 Apache-2.0 402 0 1 Updated Sep 9, 2026
  • SPOCTT Public

    Tools, tutorials, and resources associated with the SPOCTT initiative (Scientific and Public Outreach of Cell Type Taxonomies)

    AllenInstitute/SPOCTT's past year of commit activity
    Jupyter Notebook 14 BSD-3-Clause 3 0 0 Updated Sep 8, 2026
  • axonal_connectomics_processing Public

    Software environments and deployment for axonal connectomics

    AllenInstitute/axonal_connectomics_processing's past year of commit activity
    Python 0 GPL-3.0 0 0 6 Updated Sep 8, 2026
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis's past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Sep 8, 2026
  • neuron-proofreader Public

    NeuronProofreader is a Python library for automated proofreading of split and merge mistakes in neuron reconstructions.

    AllenInstitute/neuron-proofreader's past year of commit activity
    Python 9 MIT 1 0 1 Updated Sep 8, 2026
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