Fixes cases when tool ID includes spaces

[martindemko]

like this one

[martenson]

This should likely be also fixed on L404.

Also we could use this opportunity to maybe reformat how we specify these?

submit_native_specification: >-
  -l select=1:ncpus={int(cores)}:mem={int(mem)}gb:scratch_local={int(scratch)}gb
  -l walltime={int(walltime)}:00:00
  -q {queue}
  -N {{ pulsar.nfs_prefix }}_j{job.id}__{(tool.id if '/' not in tool.id else tool.id.split('/')[-2]+'_v'+tool.id.split('/')[-1]).replace('','_')}__{user.username if user and hasattr(user, 'username') else 'anonymous'}

[martindemko]

Thanks @martenson ! I totally forgot about the others.

[martindemko]

I will also add the proposed rearrangement

[martindemko]

tested on QA2