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PR 7: adopt CosmoSIS native SACC likelihood (sacc_like), validated against the converter path - #255

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cailmdaley wants to merge 57 commits into

feat/sacc-6-blindingfrom

feat/sacc-7-sacc-like

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PR 7: adopt CosmoSIS native SACC likelihood (sacc_like), validated against the converter path#255
cailmdaley wants to merge 57 commits into
feat/sacc-6-blindingfrom
feat/sacc-7-sacc-like

Commits on Jul 9, 2026
- deps: py3.12 floor + SACC/blinding stack (sacc, firecrown, smokescreen)
  
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  d31a6f6
Commits on Jul 10, 2026
- deps: firecrown pip-import fixes (numpy<2.5 cap, NumCosmo patch script)
  
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  1d4826c
- feat(sacc_io): SACC read/write for the standard data-product layout
  
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  6050be0
- fix(sacc_io): enforce ascending grids; readers in insertion order
  
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  66bbbc0
- feat(cosmo_val): SACC writers for the born-as-SACC data products
  
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  2f4a8a8
- feat(twopoint): SACC → 2pt-FITS converter, byte-compatible with cosmosis_fitting
  
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  18ec7ff
- feat(one_covariance): SACC <-> OneCovariance file-format glue
  
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  f9b1d12
- fix(cosmo_val): tau covariance block derived from CovTauTh write-side
  
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  c631418
- feat(cosmo_val): define pseudo_cl_to_sacc_part, complete pseudo-Cl SACC part
  
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  483961f
- feat(cosmo_val): SACC part writers on cosebis / pure_eb / psf_systematics mixins
  
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  95e150f
- feat(workflow): born-as-SACC scripts (coarse/fine xi, pseudo-Cl, assemble)
  
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  ae03ea6
- fix(twopoint): fail fast on tomographic/ξ-less SACC; pin covariance gather
  
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  700a885
- test(pseudo_cl): fixture carries shear.redshift_path like the real cat_config
  
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  91f5d43
- WIP(workflow): born-as-SACC rule wiring - UNVERIFIED, interrupted mid-flight
  
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  dd474b3
- test(pseudo_cl): read the born-as-SACC part in the end-to-end catalog test
  
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  02d9cf3
- fix(workflow): wire the assemble_sacc rule and the per-statistic SACC parts
  
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  0f4a6f2
- test(assemble_sacc): integration test for the assemble_sacc.py script seam
  
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  99db96e
- fix(workflow): resolve xi_highres script path from the running checkout
  
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  9afaeaa
- fix(workflow): assemble the analysis file from the tagged pseudo-Cl + real cov
  
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  00460d8
- test(workflow): dry-run guard uses sys.executable, drops SNAKEMAKE_PROFILE
  
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  2d1747b
- docs(inference): mark inference_prep inputs pre-SACC, migration deferred to PR 7
  
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  a592bb8
- fix(pseudo_cl): born-at-declared-name kills the cross-rule pseudo-Cl collision
  
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  60b74c6
- fix(workflow): assemble fails loudly by default on the placeholder ξ covariance
  
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  e0519c8
- test(workflow): dry-run guard covers the cosmo_val assemble DAG
  
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  6a5df5b
- fix(bmodes): drop removed save_fits kwarg from run_xi_sweep's run_2pcf call
  
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  3561b36
- fix(assemble_sacc): validate expected parts, no silent statistic drop
  
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  149a50c
- Merge branch 'feat/sacc-3-2pt-converter' into feat/sacc-7-sacc-like
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  c37bdcb
- feat(sacc_like): sp_validation shim over CosmoSIS SaccClLikelihood
  
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  df87be6
- feat(inference): sacc_like ini template + config generator
  
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  1b05bf7
- feat(inference): rewire inference_prep to consume the assembled SACC
  
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  5d12350
- fix(sacc_like): keep self.sacc_data in arcmin so save_theory writes arcmin tags
  
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  db28602
- fix(inference): bind ini templates as inference_prep inputs, not params
  
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  becfeb2
- fix(sacc_like): defer cosmosis import so bare module import needs no cosmosis
  
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  151d997
Commits on Jul 16, 2026
- feat: SACC → 2pt-FITS converter + OneCovariance file-format glue
  
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  64b2b5f
Commits on Jul 18, 2026
- Merge remote-tracking branch 'origin/feat/sacc-2-sacc-io' into feat/sacc-3-2pt-converter
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- twopoint_convert: filter covariance selections by grid tag; guard empty selections
  
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  b007ed1
Commits on Jul 19, 2026
- refactor: merge twopoint_convert + one_covariance_io into sacc_interop
  
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Commits on Jul 20, 2026
- refactor: fold sacc_interop into sacc_io — one SACC module
  
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- Merge remote-tracking branch 'origin/feat/sacc-3-2pt-converter' into feat/sacc-7-sacc-like
  
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  df6a590
- fix(Dockerfile): copy source before the blinding-extra editable install
  
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  06b24c6
- fix: reconcile pr7-lineage SACC callers with guarded sacc_io API
  
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  67db676
Commits on Jul 21, 2026
- Merge branch 'feat/sacc-4-cosmo-val-sacc' into feat/sacc-7-sacc-like
  
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  0443bc7
Commits on Aug 30, 2026
Commits on Aug 31, 2026

Commits

Commits on Jul 9, 2026

Commits on Jul 10, 2026

Commits on Jul 16, 2026

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Commits on Jul 19, 2026

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Commits on Aug 31, 2026