v1.2.5

• fix to regular expression syntax warnings in prettytable.py
• fix to use of setuptools in checkmData.py thanks to meereeum
• fix to pysam import in coverage.py thanks to baptwr

v1.2.4

• fixed issue with prodigal not trying the meta model for failed genomes (fix provided by noelle-haddad)
• added Dockerfile provided by Louis-MG

v1.2.3

• changes to support numpy 2.0
• better handling of non-zero return codes from external programs

v1.2.2

• support gzipped protein files as input (thanks to alienzj for the PR)

v1.2.1

• renamed private classes to resolve multiprocessing AttributeError (thanks to misialq for the PR!)

v1.2.0

• modified how bin IDs are identified to improve output tables when processing compressed files (e.g. output bin ID will be my_bin instead of my_bin.fna)

v1.1.11

• fixed error with inverse_transformed being deprecated in newer versions of Matplotlib
• updated minimum required version of Python packages

v1.1.10

• fixed bug with missing bCalledGenes flag that was impacting a number of commands

v1.1.9

• fixed support for gzip input FASTA files

v1.1.8

• updated setup.py to include long description and fix PyPi URL