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@EpistasisLab

Epistasis Lab at Cedars Sinai

Prof. Jason H. Moore's research lab at Cedars Sinai

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  1. tpot tpot Public

    A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.

    Jupyter Notebook 10.1k 1.6k

  2. pmlb pmlb Public

    PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.

    Python 873 143

  3. KRAGEN KRAGEN Public

    Software to implement GoT with a weviate vectorized database

    Python 681 44

  4. scikit-rebate scikit-rebate Public

    A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.

    Jupyter Notebook 420 72

  5. tpot2 tpot2 Public

    ⚠️ DEPRECATED. The work in this repository was merged into the main TPOT project as version 1.0. Please visit the active repository here: https://github.com/EpistasisLab/tpot/tree/main A Python Aut…

    Jupyter Notebook 250 33

  6. Aliro Aliro Public

    Aliro: AI-Driven Data Science

    JavaScript 238 60

Repositories

Showing 10 of 89 repositories
  • scikit-rebate Public

    A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.

    EpistasisLab/scikit-rebate's past year of commit activity
    Jupyter Notebook 420 MIT 72 15 (6 issues need help) 3 Updated Sep 12, 2026
  • ASAREE Public

    A visual analytics platform for engineering, executing, and evaluating reproducible agentic AI teams using experimental design methods.

    EpistasisLab/ASAREE's past year of commit activity
    HTML 6 Apache-2.0 0 2 0 Updated Sep 10, 2026
  • motoro Public
    EpistasisLab/motoro's past year of commit activity
    Python 0 Apache-2.0 0 3 0 Updated Sep 10, 2026
  • BaseAgent Public
    EpistasisLab/BaseAgent's past year of commit activity
    Jupyter Notebook 4 MIT 0 0 0 Updated Aug 25, 2026
  • Agentic-Parent-Selection Public

    Repository for our 'Automating Parent Selection Configuration in Genetic Programming with Agentic AI' submission.

    EpistasisLab/Agentic-Parent-Selection's past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 25, 2026
  • CardioKB Public

    Cardiology-focused knowledge graph

    EpistasisLab/CardioKB's past year of commit activity
    HTML 1 0 0 0 Updated Aug 24, 2026
  • EcoXAI Public

    Multiagent automated biomedical analysis framework. Fully AI harnessed agents generating hypotheses with testing and validation.

    EpistasisLab/EcoXAI's past year of commit activity
    JavaScript 8 Apache-2.0 0 11 0 Updated Jul 24, 2026
  • epistasis_detection Public

    Implementation of an efficient algorithm to compute linear regression models for epistasis that permit varied genetic encodings (penetrance functions) of the interactions of loci and provide statistical evidence for epistasis.

    EpistasisLab/epistasis_detection's past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Jul 22, 2026
  • autoqtl Public

    Automated Quantitative Trait Locus Analysis (AutoQTL)

    EpistasisLab/autoqtl's past year of commit activity
    Python 13 GPL-3.0 2 0 0 Updated Jul 22, 2026
  • StarBASE-GP Public
    EpistasisLab/StarBASE-GP's past year of commit activity
    Python 6 GPL-3.0 1 1 1 Updated Jul 22, 2026
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