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Handle multiple special chars in plate based assay measure field #7288

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Merged
labkey-tchad merged 2 commits into from
Dec 24, 2025
Merged

Handle multiple special chars in plate based assay measure field #7288

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b2200f5
Handle multiple special chars in plate based assay measure field
labkey-tchad Dec 22, 2025
4886dc6
handle spaces around colon in annotation
labkey-tchad Dec 23, 2025
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11 changes: 5 additions & 6 deletions assay/src/org/labkey/assay/plate/AssayPlateMetadataServiceImpl.java
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Original file line number Diff line number Diff line change
Expand Up @@ -96,7 +96,6 @@
import org.labkey.api.util.logging.LogHelper;
import org.labkey.api.view.ActionURL;
import org.labkey.assay.TSVProtocolSchema;
import org.labkey.assay.plate.data.WellData;
import org.labkey.assay.plate.model.WellBean;
import org.labkey.assay.plate.query.PlateSchema;
import org.labkey.assay.plate.query.PlateTable;
Expand Down Expand Up @@ -706,13 +705,13 @@ public PlateGridInfo(PlateUtils.GridInfo info, PlateSet plateSet, Set<String> me

private @Nullable String getPrefixedValue(String annotation, String prefix)
{
if (annotation != null && annotation.trim().toLowerCase().startsWith(prefix))
if (annotation != null)
{
String[] parts = annotation.split(":");
if (parts.length > 1)
// Issue 52782: measure name may contain a colon
String[] parts = annotation.split(":", 2);
if (parts.length == 2 && parts[0].trim().equalsIgnoreCase(prefix))
{
// Issue 52782: measure name may contain a colon, so we need to join the rest of the parts
return StringUtils.join(parts, ":", 1, parts.length).trim();
return parts[1].trim();
}
}
return null;
Expand Down