feat: enable CTO to import agents from GitHub repos#8
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siddhijadhav27 wants to merge 2106 commits into
Open
feat: enable CTO to import agents from GitHub repos#8siddhijadhav27 wants to merge 2106 commits into
siddhijadhav27 wants to merge 2106 commits into
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…pai#3742) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Heartbeat runs are the control-plane record of what agents did, why they woke up, and what operators should see next > - Run lists, stranded issue comments, and live log polling all depend on compact but accurate heartbeat summaries > - The current branch had a focused backend slice that improves how run result JSON is summarized, how stale process recovery comments are written, and how live log polling resolves the active run > - This pull request isolates that heartbeat/runtime reliability work from the unrelated UI and dev-tooling changes > - The benefit is more reliable issue context and cheaper run lookups without dragging unrelated board UI changes into the same review ## What Changed - Include the latest run failure in stranded issue comments during orphaned process recovery. - Bound heartbeat `result_json` payloads for list responses while preserving the raw stored payloads. - Narrow heartbeat log endpoint lookups so issue polling resolves the relevant active run with less unnecessary scanning. - Add focused tests for heartbeat list summaries, live run polling, orphaned process recovery, and the run context/result summary helpers. ## Verification - `pnpm vitest run server/src/__tests__/heartbeat-context-summary.test.ts server/src/__tests__/heartbeat-list.test.ts server/src/__tests__/agent-live-run-routes.test.ts server/src/__tests__/heartbeat-process-recovery.test.ts` ## Risks - The main risk is accidentally hiding a field that some client still expects from summarized `result_json`, or over-constraining the live log lookup path for edge-case run routing. - Recovery comments now surface the latest failure more aggressively, so wording changes may affect downstream expectations if anyone parses those comments too strictly. ## Model Used - OpenAI Codex, GPT-5-based coding agent in the Codex CLI environment. Exact backend model deployment ID was not exposed in-session. Tool-assisted editing and shell execution were used. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Every run emits a streaming log that the web UI polls so humans can watch what the agent is doing > - Log responses go out without explicit cache directives, so Express adds an ETag > - If the first poll lands before any bytes have been written, the browser caches the empty / partial snapshot and keeps getting `304 Not Modified` on every subsequent poll > - The transcript pane then stays stuck on "Waiting for transcript…" even after the log has plenty of content > - This pull request sets `Cache-Control: no-cache, no-store` on both run-log endpoints so the conditional-request path is defeated ## What Changed - `server/src/routes/agents.ts` — `GET /heartbeat-runs/:runId/log` now sets `Cache-Control: no-cache, no-store` on the response. - Same change applied to `GET /workspace-operations/:operationId/log` (same structure, same bug). ## Verification - Reproduction: start a long-running agent, watch the transcript pane. Before the fix, open devtools and observe `304 Not Modified` on each poll after the initial 200 with an empty body; the UI never updates. After the fix, each poll is a 200 with fresh bytes. - Existing tests pass. ## Risks Low. Cache headers only affect whether the browser revalidates; the response body is unchanged. No API surface change. ## Model Used Claude Opus 4.6 (1M context), extended thinking mode. ## Checklist - [x] Thinking path traces from project context to this change - [x] Model used specified - [x] Tests run locally and pass - [x] CI green - [x] Greptile review addressed
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Operators rely on issue, inbox, and routine views to understand what the company is doing in real time > - Those views need to stay fast and readable even when issue lists, markdown comments, and run metadata get large > - The current branch had a coherent set of UI and live-update improvements spread across issue search, issue detail rendering, routine affordances, and workspace lookups > - This pull request groups those board-facing changes into one standalone branch that can merge independently of the heartbeat/runtime work > - The benefit is a faster, clearer issue and routine workflow without changing the underlying task model ## What Changed - Show routine execution issues by default and rename the filter to `Hide routine runs` so the default state no longer looks like an active filter. - Show the routine name in the run dialog and tighten the issue properties pane with a workspace link, copy-on-click behavior, and an inline parent arrow. - Reduce issue detail rerenders, keep queued issue chat mounted, improve issues page search responsiveness, and speed up issues first paint. - Add inbox "other search results", refresh visible issue runs after status updates, and optimize workspace lookups through summary-mode execution workspace queries. - Improve markdown wrapping and scrolling behavior for long strings and self-comment code blocks. - Relax the markdown sanitizer assertion so the test still validates safety after the new wrap-friendly inline styles. ## Verification - `pnpm vitest run ui/src/components/IssuesList.test.tsx ui/src/lib/inbox.test.ts ui/src/pages/Issues.test.tsx ui/src/context/BreadcrumbContext.test.tsx ui/src/context/LiveUpdatesProvider.test.ts ui/src/components/MarkdownBody.test.tsx ui/src/api/execution-workspaces.test.ts server/src/__tests__/execution-workspaces-routes.test.ts` ## Risks - This touches several issue-facing UI surfaces at once, so regressions would most likely show up as stale rendering, search result mismatches, or small markdown presentation differences. - The workspace lookup optimization depends on the summary-mode route shape staying aligned between server and UI. ## Model Used - OpenAI Codex, GPT-5-based coding agent in the Codex CLI environment. Exact backend model deployment ID was not exposed in-session. Tool-assisted editing and shell execution were used. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The board depends on issue, inbox, cost, and company-skill surfaces to stay accurate and fast while agents are actively working > - The PAP-1497 follow-up branch exposed a few rough edges in those surfaces: stale active-run state on completed issues, missing creator filters, oversized issue payload scans, and placeholder issue-route parsing > - Those gaps make the control plane harder to trust because operators can see misleading run state, miss the right subset of work, or pay extra query/render cost on large issue records > - This pull request tightens those follow-ups across server and UI code, and adds regression coverage for the affected paths > - The benefit is a more reliable issue workflow, safer high-volume cost aggregation, and clearer board/operator navigation ## What Changed - Added the `v2026.415.0` release changelog entry. - Fixed stale issue-run presentation after completion and reused the shared issue-path parser so literal route placeholders no longer become issue links. - Added creator filters to the Issues page and Inbox, including persisted filter-state normalization and regression coverage. - Bounded issue detail/list project-mention scans and trimmed large issue-list payload fields to keep issue reads lighter. - Hardened company-skill list projection and cost/finance aggregation so large markdown blobs and large summed values do not leak into list responses or overflow 32-bit casts. - Added targeted server/UI regression tests for company skills, costs/finance, issue mention scanning, creator filters, inbox normalization, and issue reference parsing. ## Verification - `pnpm exec vitest run server/src/__tests__/company-skills-service.test.ts server/src/__tests__/costs-service.test.ts server/src/__tests__/issues-goal-context-routes.test.ts server/src/__tests__/issues-service.test.ts ui/src/lib/inbox.test.ts ui/src/lib/issue-filters.test.ts ui/src/lib/issue-reference.test.ts` - `gh pr checks 3779` Current pass set on the PR head: `policy`, `verify`, `e2e`, `security/snyk (cryppadotta)`, `Greptile Review` ## Risks - Creator filter options are derived from the currently loaded issue/agent data, so very sparse result sets may not surface every historical creator until they appear in the active dataset. - Cost/finance aggregate casts now use `double precision`; that removes the current overflow risk, but future schema changes should keep large-value aggregation behavior under review. - Issue detail mention scanning now skips comment-body scans on the detail route, so any consumer that relied on comment-only project mentions there would need to fetch them separately. ## Model Used - OpenAI Codex, GPT-5-based coding agent with terminal tool use and local code execution in the Paperclip workspace. Exact internal model ID/context-window exposure is not surfaced in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is the control plane for autonomous AI companies, and stable releases need a clear changelog artifact for operators upgrading between versions. > - The release-note workflow in this repo stores one stable changelog file per release under `releases/`. > - `v2026.410.0` and `v2026.413.0` were intermediate drafts for the same release window, while the next stable release is `v2026.416.0`. > - Keeping superseded draft release notes around would make the stable release history noisy and misleading. > - This pull request consolidates the intended content into `releases/v2026.416.0.md` and removes the older `releases/v2026.410.0.md` and `releases/v2026.413.0.md` files. > - The benefit is a single canonical stable release note for `v2026.416.0` with no duplicate release artifacts. ## What Changed - Added `releases/v2026.416.0.md` as the canonical stable changelog for the April 16, 2026 release. - Removed the superseded `releases/v2026.410.0.md` and `releases/v2026.413.0.md` draft release-note files. - Kept the final release-note ordering and content as edited in the working tree before commit. ## Verification - Reviewed the git diff to confirm the PR only changes release-note artifacts in `releases/`. - Confirmed the branch is based on `public-gh/master` and contains a single release-note commit. - Did not run tests because this is a docs-only changelog update. ## Risks - Low risk. The change is limited to release-note markdown files. - The main risk is editorial: if any release item was meant to stay in a separate changelog file, it now exists only in `v2026.416.0.md`. ## Model Used - OpenAI GPT-5 Codex, model `gpt-5.4`, medium reasoning, tool use and code execution in the Codex CLI environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
…ipai#3561) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The heartbeat service monitors agent health via PID liveness checks for local adapters > - `SESSIONED_LOCAL_ADAPTERS` in `heartbeat.ts` controls which adapters get PID tracking and retry-on-lost behavior > - `hermes_local` (the Hermes Agent adapter) was missing from this set > - Without it, the orphan reaper immediately marks all Hermes runs as `process_lost` instead of retrying > - This PR adds the one-line registration so `hermes_local` gets the same treatment as `claude_local`, `codex_local`, `cursor`, and `gemini_local` > - The benefit is Hermes agent runs complete normally instead of being killed after ~5 minutes ## What Changed - Added `"hermes_local"` to the `SESSIONED_LOCAL_ADAPTERS` set in `server/src/services/heartbeat.ts` ## Verification - Trigger a Hermes agent run via the wakeup API - Confirm `heartbeat_runs.status` transitions to `succeeded` (not `process_lost`) - Tested end-to-end on a production Paperclip instance with Hermes agent running heartbeat cycles for 48+ hours ## Risks Low risk. Additive one-line change — adds a string to an existing set. No behavioral change for other adapters. Consistent with `BUILTIN_ADAPTER_TYPES` which already includes `hermes_local`. ## Model Used - Provider: Anthropic - Model: Claude Opus 4.6 (claude-opus-4-6) - Context window: 1M tokens - Capabilities: Tool use, code execution ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Antoine Khater <akhater@users.noreply.github.com> Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
…ai#3828) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Each adapter advertises a model list that powers the agent config UI dropdown > - The `claude_local` adapter's dropdown is sourced from the hard-coded `models` array in `packages/adapters/claude-local/src/index.ts` > - Anthropic recently released Opus 4.7, the newest current-generation Opus model > - Without a list entry, users cannot discover or select Opus 4.7 from the dropdown (they can still type it manually, since the field is creatable, but discoverability is poor) > - This pull request adds `claude-opus-4-7` to the `claude_local` model list so new agents can be configured with the latest model by default > - The benefit is out-of-the-box access to the newest Opus model, consistent with how every other current-generation Claude model is already listed ## What Changed - Added `{ id: "claude-opus-4-7", label: "Claude Opus 4.7" }` as the **first** entry of the `models` array in `packages/adapters/claude-local/src/index.ts`. Newest-first ordering matches the convention already used for 4.6. ## Verification - `pnpm --filter @paperclipai/adapter-claude-local typecheck` → passes. - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/adapter-models.test.ts src/__tests__/claude-local-adapter.test.ts` → 12/12 passing (both directly-related files). - No existing test pins the `claude_local` models array (see `server/src/__tests__/adapter-models.test.ts`), so appending a new entry is non-breaking. - Manual check of UI consumer: `AgentConfigForm.tsx` fetches the list via `agentsApi.adapterModels()` and renders it in a creatable popover — no hard-coded expectations anywhere in the UI layer. - Screenshots: single new option appears at the top of the Claude Code (local) model dropdown; existing options unchanged. ## Risks - Low risk. Purely additive: one new entry in a list consumed by a UI dropdown. No behavior change for existing agents, no schema change, no migration, no env var. - `BEDROCK_MODELS` in `packages/adapters/claude-local/src/server/models.ts` is intentionally **not** touched — the exact region-qualified Bedrock id for Opus 4.7 is not yet confirmed, and shipping a guessed id could produce a broken option for Bedrock users. Tracked as a follow-up on the linked issue. ## Model Used - None — human-authored. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable (no tests needed: existing suite already covers the list-consumer paths) - [x] If this change affects the UI, I have included before/after screenshots (dropdown gains one new top entry; all other entries unchanged) - [x] I have updated relevant documentation to reflect my changes (no doc update needed: `docs/adapters/claude-local.md` uses `claude-opus-4-6` only as an example, still valid) - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Closes paperclipai#3827
…Rs (paperclipai#3835) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - As the project grows, more contributors want to build features — which is great > - Without a public roadmap or clear contribution guidance, contributors spend time on PRs that overlap with planned core work > - This creates frustration on both sides when those PRs can't be merged > - This PR publishes a roadmap, updates the contribution guide with a clear path for feature proposals, and reinforces the workflow in the PR template > - The benefit is that contributors know exactly how to propose features and where to focus for the highest-impact contributions ## What Changed - Added `ROADMAP.md` with expanded descriptions of all shipped and planned milestones, plus guidance on coordinating feature contributions - Added "Feature Contributions" section to `CONTRIBUTING.md` explaining how to propose features (check roadmap → discuss in #dev → consider the plugin system) - Updated `.github/PULL_REQUEST_TEMPLATE.md` with a callout linking to the roadmap and a new checklist item to check for overlap with planned work, while preserving the newer required `Model Used` section from `master` - Added `Memory / Knowledge` to the README roadmap preview and linked the preview to the full `ROADMAP.md` ## Verification - Open `ROADMAP.md` on GitHub and confirm it renders correctly with all milestone sections - Read the new "Feature Contributions" section in `CONTRIBUTING.md` and verify all links resolve - Open a new PR and confirm the template shows the roadmap callout and the new checklist item - Verify README links to `ROADMAP.md` and the roadmap preview includes "Memory / Knowledge" ## Risks - Docs-only change — no runtime or behavioral impact - Contribution policy changes were written to be constructive and to offer clear alternative paths (plugins, coordination via #dev, reference implementations as feedback) ## Model Used - OpenAI Codex local agent (GPT-5-based coding model; exact runtime model ID is not exposed in this environment) - Tool use enabled for shell, git, GitHub CLI, and patch application - Used to rebase the branch, resolve merge conflicts, update the PR metadata, and verify the repo state ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have run tests locally and they pass - [ ] I have added or updated tests where applicable (N/A — docs only) - [ ] If this change affects the UI, I have included before/after screenshots (N/A — no UI changes) - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is the control plane for autonomous AI companies, and the Docker image is the no-local-Node path for running that control plane. > - The deploy workflow builds and pushes that image from the repository `Dockerfile`. > - The current image setup adds GitHub CLI through GitHub's external apt repository and verifies a mutable keyring URL with a pinned SHA256. > - GitHub rotated the CLI Linux package signing key, so that pinned keyring checksum now fails before Buildx can publish the image. > - Paperclip already has a repo-local precedent in `docker/untrusted-review/Dockerfile`: install Debian trixie's packaged `gh` directly from the base distribution. > - This pull request removes the external GitHub CLI apt keyring/repository path from the production image and installs `gh` with the rest of the Debian packages. > - The benefit is a simpler Docker build that no longer fails when GitHub rotates the apt keyring file. ## What Changed - Updated the main `Dockerfile` base stage to install `gh` from Debian trixie's package repositories. - Removed the mutable GitHub CLI apt keyring download, pinned checksum verification, extra apt source, second `apt-get update`, and separate `gh` install step. ## Verification - `git diff --check` - `./scripts/docker-build-test.sh` skipped because Docker is installed but the daemon is not running on this machine. - Confirmed `https://packages.debian.org/trixie/gh` returns HTTP 200, matching the base image distribution package source. ## Risks - Debian's `gh` package can lag the latest upstream GitHub CLI release. This is acceptable for the current image contract, which requires `gh` availability but does not document a latest-upstream version guarantee. - A full image build still needs to run in CI because the local Docker daemon is unavailable in this environment. ## Model Used - OpenAI Codex, GPT-5-based coding agent. Exact backend model ID was not exposed in this runtime; tool use and shell execution were enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is the control plane that runs long-lived AI-agent work in production. > - The production container image is the runtime boundary for agent tools and shell access. > - In our deployment, Paperclip agents now need a native SSH client and `jq` available inside the final runtime container. > - Installing those tools only via ai-rig entrypoint hacks is brittle and drifts from the image source of truth. > - This pull request updates the production Docker image itself so the required binaries are present whenever the image is built. > - The change is intentionally scoped to the final production stage so build/deps stages do not gain extra packages unnecessarily. > - The benefit is a cleaner, reproducible runtime image with fewer deploy-specific workarounds. ## What Changed - Added `openssh-client` to the production Docker image stage. - Added `jq` to the production Docker image stage. - Kept the package install in the final `production` stage instead of the shared base stage to minimize scope. ## Verification - Reviewed the final Dockerfile diff to confirm the packages are installed in the `production` stage only. - Attempted local image build with: - `docker build --target production -t paperclip:ssh-jq-test .` - Local build could not be completed in this environment because the local Docker daemon was unavailable: - `Cannot connect to the Docker daemon at unix:///Users/roman/.docker/run/docker.sock. Is the docker daemon running?` ## Risks - Low risk: image footprint increases slightly because two Debian packages are added. - `openssh-client` expands runtime capability, so this is appropriate only because the deployed Paperclip runtime explicitly needs SSH access. ## Model Used - OpenAI Codex / `gpt-5.4` - Tool-using agent workflow via Hermes - Context from local repository inspection, git, and shell tooling ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [ ] I have run tests locally and they pass - [ ] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - V1 needs to stay local-first while also supporting shared, authenticated deployments. > - Human operators need real identities, company membership, invite flows, profile surfaces, and company-scoped access controls. > - Agents and operators also need the existing issue, inbox, workspace, approval, and plugin flows to keep working under those authenticated boundaries. > - This branch accumulated the multi-user implementation, follow-up QA fixes, workspace/runtime refinements, invite UX improvements, release-branch conflict resolution, and review hardening. > - This pull request consolidates that branch onto the current `master` branch as a single reviewable PR. > - The benefit is a complete multi-user implementation path with tests and docs carried forward without dropping existing branch work. ## What Changed - Added authenticated human-user access surfaces: auth/session routes, company user directory, profile settings, company access/member management, join requests, and invite management. - Added invite creation, invite landing, onboarding, logo/branding, invite grants, deduped join requests, and authenticated multi-user E2E coverage. - Tightened company-scoped and instance-admin authorization across board, plugin, adapter, access, issue, and workspace routes. - Added profile-image URL validation hardening, avatar preservation on name-only profile updates, and join-request uniqueness migration cleanup for pending human requests. - Added an atomic member role/status/grants update path so Company Access saves no longer leave partially updated permissions. - Improved issue chat, inbox, assignee identity rendering, sidebar/account/company navigation, workspace routing, and execution workspace reuse behavior for multi-user operation. - Added and updated server/UI tests covering auth, invites, membership, issue workspace inheritance, plugin authz, inbox/chat behavior, and multi-user flows. - Merged current `public-gh/master` into this branch, resolved all conflicts, and verified no `pnpm-lock.yaml` change is included in this PR diff. ## Verification - `pnpm exec vitest run server/src/__tests__/issues-service.test.ts ui/src/components/IssueChatThread.test.tsx ui/src/pages/Inbox.test.tsx` - `pnpm run preflight:workspace-links && pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts` - `pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts server/src/__tests__/workspace-runtime-service-authz.test.ts server/src/__tests__/access-validators.test.ts` - `pnpm exec vitest run server/src/__tests__/authz-company-access.test.ts server/src/__tests__/routines-routes.test.ts server/src/__tests__/sidebar-preferences-routes.test.ts server/src/__tests__/approval-routes-idempotency.test.ts server/src/__tests__/openclaw-invite-prompt-route.test.ts server/src/__tests__/agent-cross-tenant-authz-routes.test.ts server/src/__tests__/routines-e2e.test.ts` - `pnpm exec vitest run server/src/__tests__/auth-routes.test.ts ui/src/pages/CompanyAccess.test.tsx` - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/db typecheck && pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck` - `pnpm db:generate` - `npx playwright test --config tests/e2e/playwright.config.ts --list` - Confirmed branch has no uncommitted changes and is `0` commits behind `public-gh/master` before PR creation. - Confirmed no `pnpm-lock.yaml` change is staged or present in the PR diff. ## Risks - High review surface area: this PR contains the accumulated multi-user branch plus follow-up fixes, so reviewers should focus especially on company-boundary enforcement and authenticated-vs-local deployment behavior. - UI behavior changed across invites, inbox, issue chat, access settings, and sidebar navigation; no browser screenshots are included in this branch-consolidation PR. - Plugin install, upgrade, and lifecycle/config mutations now require instance-admin access, which is intentional but may change expectations for non-admin board users. - A join-request dedupe migration rejects duplicate pending human requests before creating unique indexes; deployments with unusual historical duplicates should review the migration behavior. - Company member role/status/grant saves now use a new combined endpoint; older separate endpoints remain for compatibility. - Full production build was not run locally in this heartbeat; CI should cover the full matrix. ## Model Used - OpenAI Codex coding agent, GPT-5-based model, CLI/tool-use environment. Exact deployed model identifier and context window were not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Note on screenshots: this is a branch-consolidation PR for an already-developed multi-user branch, and no browser screenshots were captured during this heartbeat. --------- Co-authored-by: dotta <dotta@example.com> Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Heartbeat runs are the control-plane record of each agent execution window. > - Long-running local agents can exhaust context or stop while still holding useful next-step state. > - Operators need that stop reason, next action, and continuation path to be durable and visible. > - This pull request adds run liveness metadata, continuation summaries, and UI surfaces for issue run ledgers. > - The benefit is that interrupted or long-running work can resume with clearer context instead of losing the agent's last useful handoff. ## What Changed - Added heartbeat-run liveness fields, continuation attempt tracking, and an idempotent `0058` migration. - Added server services and tests for run liveness, continuation summaries, stop metadata, and activity backfill. - Wired local and HTTP adapters to surface continuation/liveness context through shared adapter utilities. - Added shared constants, validators, and heartbeat types for liveness continuation state. - Added issue-detail UI surfaces for continuation handoffs and the run ledger, with component tests. - Updated agent runtime docs, heartbeat protocol docs, prompt guidance, onboarding assets, and skills instructions to explain continuation behavior. - Addressed Greptile feedback by scoping document evidence by run, excluding system continuation-summary documents from liveness evidence, importing shared liveness types, surfacing hidden ledger run counts, documenting bounded retry behavior, and moving run-ledger liveness backfill off the request path. ## Verification - `pnpm exec vitest run packages/adapter-utils/src/server-utils.test.ts server/src/__tests__/run-continuations.test.ts server/src/__tests__/run-liveness.test.ts server/src/__tests__/activity-service.test.ts server/src/__tests__/documents-service.test.ts server/src/__tests__/issue-continuation-summary.test.ts server/src/services/heartbeat-stop-metadata.test.ts ui/src/components/IssueRunLedger.test.tsx ui/src/components/IssueContinuationHandoff.test.tsx ui/src/components/IssueDocumentsSection.test.tsx` - `pnpm --filter @paperclipai/db build` - `pnpm exec vitest run server/src/__tests__/activity-service.test.ts ui/src/components/IssueRunLedger.test.tsx` - `pnpm --filter @paperclipai/ui typecheck` - `pnpm --filter @paperclipai/server typecheck` - `pnpm exec vitest run server/src/__tests__/activity-service.test.ts server/src/__tests__/run-continuations.test.ts ui/src/components/IssueRunLedger.test.tsx` - `pnpm exec vitest run server/src/__tests__/heartbeat-process-recovery.test.ts -t "treats a plan document update"` - `pnpm exec vitest run server/src/__tests__/activity-service.test.ts server/src/__tests__/heartbeat-process-recovery.test.ts -t "activity service|treats a plan document update"` - Remote PR checks on head `e53b1a1d`: `verify`, `e2e`, `policy`, and Snyk all passed. - Confirmed `public-gh/master` is an ancestor of this branch after fetching `public-gh master`. - Confirmed `pnpm-lock.yaml` is not included in the branch diff. - Confirmed migration `0058_wealthy_starbolt.sql` is ordered after `0057` and uses `IF NOT EXISTS` guards for repeat application. - Greptile inline review threads are resolved. ## Risks - Medium risk: this touches heartbeat execution, liveness recovery, activity rendering, issue routes, shared contracts, docs, and UI. - Migration risk is mitigated by additive columns/indexes and idempotent guards. - Run-ledger liveness backfill is now asynchronous, so the first ledger response can briefly show historical missing liveness until the background backfill completes. - UI screenshot coverage is not included in this packaging pass; validation is currently through focused component tests. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4, local tool-use coding agent with terminal, git, GitHub connector, GitHub CLI, and Paperclip API access. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Screenshot note: no before/after screenshots were captured in this PR packaging pass; the UI changes are covered by focused component tests listed above. --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is a local-first control plane for AI-agent companies. > - Operators need predictable local dev behavior, recoverable instance data, and scripts that do not churn the running app. > - Several accumulated changes improve backup streaming, dev-server health, static UI caching/logging, diagnostic-file ignores, and instance isolation. > - These are operational improvements that can land independently from product UI work. > - This pull request groups the dev-infra and backup changes from the split branch into one standalone branch. > - The benefit is safer local operation, easier manual backups, less noisy dev output, and less cross-instance auth leakage. ## What Changed - Added a manual instance database backup endpoint and route tests. - Streamed backup/restore handling to avoid materializing large payloads at once. - Reduced dev static UI log/cache churn and ignored Node diagnostic report captures. - Added guarded dev auto-restart health polling coverage. - Preserved worktree config during provisioning and scoped auth cookies by instance. - Added a Discord daily digest helper script and environment documentation. - Hardened adapter-route and startup feedback export tests around the changed infrastructure. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run packages/db/src/backup-lib.test.ts server/src/__tests__/instance-database-backups-routes.test.ts server/src/__tests__/server-startup-feedback-export.test.ts server/src/__tests__/adapter-routes.test.ts server/src/__tests__/dev-runner-paths.test.ts server/src/__tests__/health-dev-server-token.test.ts server/src/__tests__/http-log-policy.test.ts server/src/__tests__/vite-html-renderer.test.ts server/src/__tests__/workspace-runtime.test.ts server/src/__tests__/better-auth.test.ts` - Split integration check: merged after the runtime/governance branch and before UI branches with no merge conflicts. - Confirmed this branch does not include `pnpm-lock.yaml`. ## Risks - Medium risk: touches server startup, backup streaming, auth cookie naming, dev health checks, and worktree provisioning. - Backup endpoint behavior depends on existing board/admin access controls and database backup helpers. - No database migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4 tool-enabled coding model, agentic code-editing/runtime with local shell and GitHub CLI access; exact context window and reasoning mode are not exposed by the Paperclip harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is moving from a solo local operator model toward teams supervising AI-agent companies. > - Human access management and human-visible profile surfaces are part of that multiple-user path. > - The branch included related access cleanup, archived-member removal, permission protection, and a user profile page. > - These changes share company membership, user attribution, and access-service behavior. > - This pull request groups those human access/profile changes into one standalone branch. > - The benefit is safer member removal behavior and a first profile surface for user work, activity, and cost attribution. ## What Changed - Added archived company member removal support across shared contracts, server routes/services, and UI. - Protected company member removal with stricter permission checks and tests. - Added company user profile API, shared types, route wiring, client API, route, and UI page. - Simplified the user profile page visual design to a neutral typography-led layout. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/__tests__/access-service.test.ts server/src/__tests__/user-profile-routes.test.ts ui/src/pages/CompanyAccess.test.tsx --hookTimeout=30000` - `pnpm exec vitest run server/src/__tests__/user-profile-routes.test.ts --testTimeout=30000 --hookTimeout=30000` after an initial local embedded-Postgres hook timeout in the combined run. - Split integration check: merged after runtime/governance and dev-infra/backups with no merge conflicts. - Confirmed this branch does not include `pnpm-lock.yaml`. ## Risks - Medium risk: changes member removal permissions and adds a new user profile route with cross-table stats. - The profile page is a new UI surface and may need visual follow-up in browser QA. - No database migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4 tool-enabled coding model, agentic code-editing/runtime with local shell and GitHub CLI access; exact context window and reasoning mode are not exposed by the Paperclip harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip agents do real work in project and execution workspaces. > - Operators need workspace state to be visible, navigable, and copyable without digging through raw run logs. > - The branch included related workspace cards, navigation, runtime controls, stale-service handling, and issue-property visibility. > - These changes share the workspace UI and runtime-control surfaces and can stand alone from unrelated access/profile work. > - This pull request groups the workspace experience changes into one standalone branch. > - The benefit is a clearer workspace overview, better metadata copy flows, and more accurate runtime service controls. ## What Changed - Polished project workspace summary cards and made workspace metadata copyable. - Added a workspace navigation overview and extracted reusable project workspace content. - Squared and polished the execution workspace configuration page. - Fixed stale workspace command matching and hid stopped stale services in runtime controls. - Showed live workspace service context in issue properties. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/components/ProjectWorkspaceSummaryCard.test.tsx ui/src/lib/project-workspaces-tab.test.ts ui/src/components/Sidebar.test.tsx ui/src/components/WorkspaceRuntimeControls.test.tsx ui/src/components/IssueProperties.test.tsx` - `pnpm exec vitest run packages/shared/src/workspace-commands.test.ts --config /dev/null` because the root Vitest project config does not currently include `packages/shared` tests. - Split integration check: merged after runtime/governance, dev-infra/backups, and access/profiles with no merge conflicts. - Confirmed this branch does not include `pnpm-lock.yaml`. ## Risks - Medium risk: touches workspace navigation, runtime controls, and issue property rendering. - Visual layout changes may need browser QA, especially around smaller screens and dense workspace metadata. - No database migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4 tool-enabled coding model, agentic code-editing/runtime with local shell and GitHub CLI access; exact context window and reasoning mode are not exposed by the Paperclip harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip operators spend much of their time in issues, inboxes, selectors, and rich comment threads. > - Small interaction problems in those surfaces slow down supervision of AI-agent work. > - The branch included related operator quality-of-life fixes for issue layout, inbox actions, recent selectors, mobile inputs, and chat rendering stability. > - These changes are UI-focused and can land independently from workspace navigation and access-profile work. > - This pull request groups the operator QoL fixes into one standalone branch. > - The benefit is a more stable and efficient board workflow for issue triage and task editing. ## What Changed - Widened issue detail content and added a desktop inbox archive action. - Fixed mobile text-field zoom by keeping touch input font sizes at 16px. - Prioritized recent picker selections for assignees/projects in issue and routine flows. - Showed actionable approvals in the Mine inbox model. - Fixed issue chat renderer state crashes and hardened tests. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/components/IssueChatThread.test.tsx ui/src/lib/inbox.test.ts ui/src/lib/recent-selections.test.ts` - Split integration check: merged last after the other [PAP-1614](/PAP/issues/PAP-1614) branches with no merge conflicts. - Confirmed this branch does not include `pnpm-lock.yaml`. ## Risks - Low to medium risk: mostly UI state, layout, and selection-priority behavior. - Visual layout and mobile zoom behavior may need browser/device QA beyond component tests. - No database migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4 tool-enabled coding model, agentic code-editing/runtime with local shell and GitHub CLI access; exact context window and reasoning mode are not exposed by the Paperclip harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - The heartbeat runtime, agent import path, and agent configuration defaults determine whether work is dispatched safely and predictably. > - Several accumulated fixes all touched agent execution recovery, wake routing, import behavior, and runtime concurrency defaults. > - Those changes need to land together so the heartbeat service and agent creation defaults stay internally consistent. > - This pull request groups the runtime/governance changes from the split branch into one standalone branch. > - The benefit is safer recovery for stranded runs, bounded high-volume reads, imported-agent approval correctness, skill-template support, and a clearer default concurrency policy. ## What Changed - Fixed stranded continuation recovery so successful automatic retries are requeued instead of incorrectly blocking the issue. - Bounded high-volume issue/log reads across issue, heartbeat, agent, project, and workspace paths. - Fixed imported-agent approval and instruction-path permission handling. - Quarantined seeded worktree execution state during worktree provisioning. - Queued approval follow-up wakes and hardened SQL_ASCII heartbeat output handling. - Added reusable agent instruction templates for hiring flows. - Set the default max concurrent agent runs to five and updated related UI/tests/docs. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/__tests__/company-portability.test.ts server/src/__tests__/heartbeat-process-recovery.test.ts server/src/__tests__/heartbeat-comment-wake-batching.test.ts server/src/__tests__/heartbeat-list.test.ts server/src/__tests__/issues-service.test.ts server/src/__tests__/agent-permissions-routes.test.ts packages/adapter-utils/src/server-utils.test.ts ui/src/lib/new-agent-runtime-config.test.ts` - Split integration check: merged this branch first, followed by the other [PAP-1614](/PAP/issues/PAP-1614) branches, with no merge conflicts. - Confirmed this branch does not include `pnpm-lock.yaml`. ## Risks - Medium risk: touches heartbeat recovery, queueing, and issue list bounds in central runtime paths. - Imported-agent and concurrency default behavior changes may affect existing automation that assumes one-at-a-time default runs. - No database migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.4 tool-enabled coding model, agentic code-editing/runtime with local shell and GitHub CLI access; exact context window and reasoning mode are not exposed by the Paperclip harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - The plugin system is the extension path for optional capabilities that should not require core product changes for every integration. > - Plugins need scoped host APIs for issue orchestration, documents, wakeups, summaries, activity attribution, and isolated database state. > - Without those host APIs, richer plugins either cannot coordinate Paperclip work safely or need privileged core-side special cases. > - This pull request adds the plugin orchestration host surface, scoped route dispatch, a database namespace layer, and a smoke plugin that exercises the contract. > - The benefit is a broader plugin API that remains company-scoped, auditable, and covered by tests. ## What Changed - Added plugin orchestration host APIs for issue creation, document access, wakeups, summaries, plugin-origin activity, and scoped API route dispatch. - Added plugin database namespace tables, schema exports, migration checks, and idempotent replay coverage under migration `0059_plugin_database_namespaces`. - Added shared plugin route/API types and validators used by server and SDK boundaries. - Expanded plugin SDK types, protocol helpers, worker RPC host behavior, and testing utilities for orchestration flows. - Added the `plugin-orchestration-smoke-example` package to exercise scoped routes, restricted database namespaces, issue orchestration, documents, wakeups, summaries, and UI status surfaces. - Kept the new orchestration smoke fixture out of the root pnpm workspace importer so this PR preserves the repository policy of not committing `pnpm-lock.yaml`. - Updated plugin docs and database docs for the new orchestration and database namespace surfaces. - Rebased the branch onto `public-gh/master`, resolved conflicts, and removed `pnpm-lock.yaml` from the final PR diff. ## Verification - `pnpm install --frozen-lockfile` - `pnpm --filter @paperclipai/db typecheck` - `pnpm exec vitest run packages/db/src/client.test.ts` - `pnpm exec vitest run server/src/__tests__/plugin-database.test.ts server/src/__tests__/plugin-orchestration-apis.test.ts server/src/__tests__/plugin-routes-authz.test.ts server/src/__tests__/plugin-scoped-api-routes.test.ts server/src/__tests__/plugin-sdk-orchestration-contract.test.ts` - From `packages/plugins/examples/plugin-orchestration-smoke-example`: `pnpm exec vitest run --config ./vitest.config.ts` - `pnpm --dir packages/plugins/examples/plugin-orchestration-smoke-example run typecheck` - `pnpm --filter @paperclipai/server typecheck` - PR CI on latest head `293fc67c`: `policy`, `verify`, `e2e`, and `security/snyk` all passed. ## Risks - Medium risk: this expands plugin host authority, so route auth, company scoping, and plugin-origin activity attribution need careful review. - Medium risk: database namespace migration behavior must remain idempotent for environments that may have seen earlier branch versions. - Medium risk: the orchestration smoke fixture is intentionally excluded from the root workspace importer to avoid a `pnpm-lock.yaml` PR diff; direct fixture verification remains listed above. - Low operational risk from the PR setup itself: the branch is rebased onto current `master`, the migration is ordered after upstream `0057`/`0058`, and `pnpm-lock.yaml` is not in the final diff. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. Roadmap checked: this work aligns with the completed Plugin system milestone and extends the plugin surface rather than duplicating an unrelated planned core feature. ## Model Used - OpenAI Codex, GPT-5-based coding agent in a tool-enabled CLI environment. Exact hosted model build and context-window size are not exposed by the runtime; reasoning/tool use were enabled for repository inspection, editing, testing, git operations, and PR creation. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots (N/A: no core UI screen change; example plugin UI contract is covered by tests) - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Agents coordinate work through tasks and comments, and @-mentions are part of the wakeup path for cross-agent handoffs and review requests > - The current repo skill still instructs machine-authored comments to use raw `@AgentName` text as the default mention format > - But the current backend mention parsing is still unreliable for multi-word display names, so agents following that guidance can silently fail to wake the intended target > - This pull request updates the Paperclip skill and API reference to prefer structured `agent://` markdown mentions for machine-authored comments > - The benefit is a low-risk documentation workaround that steers agents onto the mention format the server already resolves reliably while broader runtime fixes are reviewed upstream ## What Changed - Updated `skills/paperclip/SKILL.md` to stop recommending raw `@AgentName` mentions for machine-authored comments - Updated `skills/paperclip/references/api-reference.md` with a concrete workflow: resolve the target via `GET /api/companies/{companyId}/agents`, then emit `[@display Name](agent://<agent-id>)` - Added explicit guidance that raw `@AgentName` text is fallback-only and unreliable for names containing spaces - Cross-referenced the current upstream mention-bug context so reviewers can connect this docs workaround to the open parser/runtime fixes Related issue/PR refs: paperclipai#448, paperclipai#459, paperclipai#558, paperclipai#669, paperclipai#722, paperclipai#1412, paperclipai#2249 ## Verification - `pnpm -r typecheck` - `pnpm build` - `pnpm test:run` currently fails on upstream `master` in existing tests unrelated to this docs-only change: - `src/__tests__/worktree.test.ts` — `seeds authenticated users into minimally cloned worktree instances` timed out after 20000ms - `src/__tests__/onboard.test.ts` — `keeps tailnet quickstart on loopback until tailscale is available` expected `127.0.0.1` but got `100.125.202.3` - Confirmed the git diff is limited to: - `skills/paperclip/SKILL.md` - `skills/paperclip/references/api-reference.md` ## Risks - Low risk. This is a docs/skill-only change and does not alter runtime behavior. - It is a mitigation, not a full fix: it helps agent-authored comments that follow the Paperclip skill, but it does not fix manually typed raw mentions or other code paths that still emit plain `@Name` text. - If upstream chooses a different long-term mention format, this guidance may need to be revised once the runtime-side fix lands. ## Model Used - OpenAI Codex desktop agent on a GPT-5-class model. Exact deployed model ID and context window are not exposed by the local harness. Tool use enabled, including shell execution, git, and GitHub CLI. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Hiring new agents depends on clear, reusable operating instructions > - The create-agent skill had one large template reference that mixed multiple roles together > - That made it harder to reuse, review, and adapt role-specific instructions during governed hires > - This pull request splits the reusable agent instruction templates into focused role files and polishes the agent instructions pane layout > - The benefit is faster, clearer agent hiring without bloating the main skill document ## What Changed - Split coder, QA, and UX designer reusable instructions into dedicated reference files. - Kept the index reference concise and pointed it at the role-specific files. - Updated the create-agent skill to describe the separated template structure. - Polished the agent detail instructions/package file tree layout so the longer template references remain readable. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `pnpm --filter @paperclipai/ui typecheck` - UI screenshot rationale: no screenshots attached because the visible change is limited to the Agent detail instructions file-tree layout (`wrapLabels` plus the side-by-side breakpoint). There is no new user flow or state transition to demonstrate; reviewers can verify visually by opening an agent's Instructions tab and resizing across the single-column and side-by-side breakpoints to confirm long file names wrap instead of truncating or overflowing. ## Risks - Low risk: this is documentation and UI layout only. - Main risk is stale links in the skill references; the new files are committed in the referenced paths. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local shell and GitHub workflow, exact runtime context window not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots, or documented why targeted component/type verification is sufficient here - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip gives operators a live view of agent work across dashboards, transcripts, and run activity charts > - Those views consume live run updates and aggregate run activity from backend dashboard data > - Missing or partial run data could make charts brittle, and live transcript updates were heavier than needed > - Operators need dashboard data to stay stable even when recent run payloads are incomplete > - This pull request hardens dashboard run aggregation, guards chart rendering, and lightens live run update handling > - The benefit is a more reliable dashboard during active agent execution ## What Changed - Added dashboard run activity types and backend aggregation coverage. - Guarded activity chart rendering when run data is missing or partial. - Reduced live transcript update churn in active agent and run chat surfaces. - Fixed issue chat avatar alignment in the thread renderer. - Added focused dashboard, activity chart, and live transcript tests. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `pnpm exec vitest run server/src/__tests__/dashboard-service.test.ts ui/src/components/ActivityCharts.test.tsx ui/src/components/transcript/useLiveRunTranscripts.test.tsx` - Result: 8 tests passed, 1 skipped. The embedded Postgres dashboard service test skipped on this host with the existing PGlite/Postgres init warning; UI chart and transcript tests passed. ## Risks - Medium-low risk: aggregation semantics changed, but the UI remains guarded around incomplete data. - The dashboard service test is host-skipped here, so CI should confirm the embedded database path. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local shell and GitHub workflow, exact runtime context window not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots, or documented why targeted component tests are sufficient here - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip models companies as teams of human and AI operators > - The org chart is the primary visual map of that company structure > - Mobile users need to pan and inspect the chart without awkward gestures or layout jumps > - The roadmap also needed to reflect that the multiple-human-users work is complete > - This pull request improves mobile org chart gestures and updates the roadmap references > - The benefit is a smoother company navigation experience and docs that match shipped multi-user support ## What Changed - Added one-finger mobile pan handling for the org chart. - Expanded org chart test coverage for touch gesture behavior. - Updated README, ROADMAP, and CLI README references to mark multiple-human-users work as complete. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `pnpm exec vitest run ui/src/pages/OrgChart.test.tsx` - Result: 4 tests passed. ## Risks - Low-medium risk: org chart pointer/touch handling changed, but the behavior is scoped to the org chart page and covered by targeted tests. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local shell and GitHub workflow, exact runtime context window not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots, or documented why targeted interaction tests are sufficient here - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
…4129) ## Thinking Path > - Paperclip runs local adapter processes for agents and streams their output into heartbeat runs > - Some adapters can emit a terminal result before all descendant processes have exited > - If those descendants keep running, a heartbeat can appear complete while the process group remains alive > - Claude local runs need a bounded cleanup path after terminal JSON output is observed and the child exits > - This pull request adds terminal-result cleanup support to adapter process utilities and wires it into the Claude local adapter > - The benefit is fewer stranded adapter process groups after successful terminal results ## What Changed - Added terminal-result cleanup options to `runChildProcess`. - Tracked child exit plus terminal output before signaling lingering process groups. - Added Claude local adapter configuration for terminal result cleanup grace time. - Added process cleanup tests covering terminal-output cleanup and noisy non-terminal runs. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `pnpm exec vitest run packages/adapter-utils/src/server-utils.test.ts` - Result: 9 tests passed. ## Risks - Medium risk: this changes adapter child-process cleanup behavior. - The cleanup only arms after terminal result detection and child exit, and it is covered by process-group tests. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local shell and GitHub workflow, exact runtime context window not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots, or documented why it is not applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents inside execution and project workspaces > - Workspace runtime services can be controlled manually by operators and reused by agent runs > - Manual start/stop state was not preserved consistently across workspace policies and routine launches > - Routine launches also needed branch/workspace variables to default from the selected workspace context > - This pull request makes runtime policy state explicit, preserves manual control, and auto-fills routine branch variables from workspace data > - The benefit is less surprising workspace service behavior and fewer manual inputs when running workspace-scoped routines ## What Changed - Added runtime-state handling for manual workspace control across execution and project workspace validators, routes, and services. - Updated heartbeat/runtime startup behavior so manually stopped services are respected. - Auto-filled routine workspace branch variables from available workspace context. - Added focused server and UI tests for workspace runtime and routine variable behavior. - Removed muted gray background styling from workspace pages and cards for a cleaner workspace UI. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `pnpm exec vitest run server/src/__tests__/routines-service.test.ts server/src/__tests__/workspace-runtime.test.ts ui/src/components/RoutineRunVariablesDialog.test.tsx` - Result: 55 tests passed, 21 skipped. The embedded Postgres routines tests skipped on this host with the existing PGlite/Postgres init warning; workspace-runtime and UI tests passed. ## Risks - Medium risk: this touches runtime service start/stop policy and heartbeat launch behavior. - The focused tests cover manual runtime state, routine variables, and workspace runtime reuse paths. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local shell and GitHub workflow, exact runtime context window not exposed in this session. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots, or documented why targeted component/service verification is sufficient here - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - The REST API is the control-plane boundary for companies, agents, plugins, adapters, costs, invites, and issue mutations. > - Several routes still relied on broad board or company access checks without consistently enforcing the narrower actor, company, and active-checkout boundaries those operations require. > - That can allow agents or non-admin users to mutate sensitive resources outside the intended governance path. > - This pull request hardens the route authorization layer and adds regression coverage for the audited API surfaces. > - The benefit is tighter multi-company isolation, safer plugin and adapter administration, and stronger enforcement of active issue ownership. ## What Changed - Added route-level authorization checks for budgets, plugin administration/scoped routes, adapter management, company import/export, direct agent creation, invite test resolution, and issue mutation/write surfaces. - Enforced active checkout ownership for agent-authenticated issue mutations, while preserving explicit management overrides for permitted managers. - Restricted sensitive adapter and plugin management operations to instance-admin or properly scoped actors. - Tightened company portability and invite probing routes so agents cannot cross company boundaries. - Updated access constants and the Company Access UI copy for the new active-checkout management grant. - Added focused regression tests covering cross-company denial, agent self-mutation denial, admin-only operations, and active checkout ownership. - Rebased the branch onto `public-gh/master` and fixed validation fallout from the rebase: heartbeat-context route ordering and a company import/export e2e fixture that now opts out of direct-hire approval before using direct agent creation. - Updated onboarding and signoff e2e setup to create seed agents through `/agent-hires` plus board approval, so they remain compatible with the approval-gated new-agent default. - Addressed Greptile feedback by removing a duplicate company export API alias, avoiding N+1 reporting-chain lookups in active-checkout override checks, allowing agent mutations on unassigned `in_progress` issues, and blocking NAT64 invite-probe targets. ## Verification - `pnpm exec vitest run server/src/__tests__/issues-goal-context-routes.test.ts cli/src/__tests__/company-import-export-e2e.test.ts` - `pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts server/src/__tests__/adapter-routes-authz.test.ts server/src/__tests__/agent-permissions-routes.test.ts server/src/__tests__/company-portability-routes.test.ts server/src/__tests__/costs-service.test.ts server/src/__tests__/invite-test-resolution-route.test.ts server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts server/src/__tests__/agent-adapter-validation-routes.test.ts` - `pnpm exec vitest run server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts` - `pnpm exec vitest run server/src/__tests__/invite-test-resolution-route.test.ts` - `pnpm -r typecheck` - `pnpm --filter server typecheck` - `pnpm --filter ui typecheck` - `pnpm build` - `pnpm test:e2e -- tests/e2e/onboarding.spec.ts tests/e2e/signoff-policy.spec.ts` - `pnpm test:e2e -- tests/e2e/signoff-policy.spec.ts` - `pnpm test:run` was also run. It failed under default full-suite parallelism with two order-dependent failures in `plugin-routes-authz.test.ts` and `routines-e2e.test.ts`; both files passed when rerun directly together with `pnpm exec vitest run server/src/__tests__/plugin-routes-authz.test.ts server/src/__tests__/routines-e2e.test.ts`. ## Risks - Medium risk: this changes authorization behavior across multiple sensitive API surfaces, so callers that depended on broad board/company access may now receive `403` or `409` until they use the correct governance path. - Direct agent creation now respects the company-level board-approval requirement; integrations that need pending hires should use `/api/companies/:companyId/agent-hires`. - Active in-progress issue mutations now require checkout ownership or an explicit management override, which may reveal workflow assumptions in older automation. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex, GPT-5 coding agent, tool-using workflow with local shell, Git, GitHub CLI, and repository tests. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - The board UI is the main operator surface, so its component and workflow coverage needs to stay reviewable as the product grows. > - This branch adds Storybook as a dedicated UI reference surface for core Paperclip screens and interaction patterns. > - That work spans Storybook infrastructure, app-level provider wiring, and a large fixture set that can render real control-plane states without a live backend. > - The branch also expands coverage across agents, budgets, issues, chat, dialogs, navigation, projects, and data visualization so future UI changes have a concrete visual baseline. > - This pull request packages that Storybook work on top of the latest `master`, excludes the lockfile from the final diff per repo policy, and fixes one fixture contract drift caught during verification. > - The benefit is a single reviewable PR that adds broad UI documentation and regression-surfacing coverage without losing the existing branch work. ## What Changed - Added Storybook 10 wiring for the UI package, including root scripts, UI package scripts, Storybook config, preview wrappers, Tailwind entrypoints, and setup docs. - Added a large fixture-backed data source for Storybook so complex board states can render without a live server. - Added story suites covering foundations, status language, control-plane surfaces, overview, UX labs, agent management, budget and finance, forms and editors, issue management, navigation and layout, chat and comments, data visualization, dialogs and modals, and projects/goals/workspaces. - Adjusted several UI components for Storybook parity so dialogs, menus, keyboard shortcuts, budget markers, markdown editing, and related surfaces render correctly in isolation. - Rebasing work for PR assembly: replayed the branch onto current `master`, removed `pnpm-lock.yaml` from the final PR diff, and aligned the dashboard fixture with the current `DashboardSummary.runActivity` API contract. ## Verification - `pnpm --filter @paperclipai/ui typecheck` - `pnpm --filter @paperclipai/ui build-storybook` - Manual diff audit after rebase: verified the PR no longer includes `pnpm-lock.yaml` and now cleanly targets current `master`. - Before/after UI note: before this branch there was no dedicated Storybook surface for these Paperclip views; after this branch the local Storybook build includes the new overview and domain story suites in `ui/storybook-static`. ## Risks - Large static fixture files can drift from shared types as dashboard and UI contracts evolve; this PR already needed one fixture correction for `runActivity`. - Storybook bundle output includes some large chunks, so future growth may need chunking work if build performance becomes an issue. - Several component tweaks were made for isolated rendering parity, so reviewers should spot-check key board surfaces against the live app behavior. ## Model Used - OpenAI Codex, GPT-5-based coding agent in the Paperclip harness; exact serving model ID is not exposed in-runtime to the agent. - Tool-assisted workflow with terminal execution, git operations, local typecheck/build verification, and GitHub CLI PR creation. - Context window/reasoning mode not surfaced by the harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
Auto-generated lockfile refresh after dependencies changed on master. This PR only updates pnpm-lock.yaml. Co-authored-by: lockfile-bot <lockfile-bot@users.noreply.github.com>
…clipai#3908) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Local adapter capability flags decide which configuration surfaces the UI and server expose for each adapter. > - `hermes_local` currently advertises managed instructions bundle support, so Paperclip exposes the AGENTS.md bundle flow for Hermes agents. > - The bundled `hermes-paperclip-adapter` only consumes `promptTemplate` at runtime and does not read `instructionsFilePath`, so that advertised bundle path silently does nothing. > - Issue paperclipai#3833 reports exactly that mismatch: users configure AGENTS.md instructions, but Hermes only receives the built-in heartbeat prompt. > - This pull request stops advertising managed instructions bundles for `hermes_local` until the adapter actually consumes bundle files at runtime. ## What Changed - Changed the built-in `hermes_local` server adapter registration to report `supportsInstructionsBundle: false`. - Updated the UI's synchronous built-in capability fallback so Hermes no longer shows the managed instructions bundle affordance on first render. - Added regression coverage in `server/src/__tests__/adapter-routes.test.ts` to assert that `hermes_local` still reports skills + local JWT support, but not instructions bundle support. ## Verification - `git diff --check` - `node --experimental-strip-types --input-type=module -e "import { findActiveServerAdapter } from './server/src/adapters/index.ts'; const adapter = findActiveServerAdapter('hermes_local'); console.log(JSON.stringify({ type: adapter?.type, supportsInstructionsBundle: adapter?.supportsInstructionsBundle, supportsLocalAgentJwt: adapter?.supportsLocalAgentJwt, supportsSkills: Boolean(adapter?.listSkills || adapter?.syncSkills) }));"` - Observed `{"type":"hermes_local","supportsInstructionsBundle":false,"supportsLocalAgentJwt":true,"supportsSkills":true}` - Added adapter-routes regression assertions for the Hermes capability contract; CI should validate the full route path in a clean workspace. ## Risks - Low risk: this only changes the advertised capability surface for `hermes_local`. - Behavior change: Hermes agents will no longer show the broken managed instructions bundle UI until the underlying adapter actually supports `instructionsFilePath`. - Existing Hermes skill sync and local JWT behavior are unchanged. ## Model Used - OpenAI Codex, GPT-5.4 class coding agent, medium reasoning, terminal/git/gh tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
## Summary This fixes the Hermes local adapter so that a configured command override is respected during both environment tests and execution. ## Problem The Hermes adapter expects `adapterConfig.hermesCommand`, but the generic local command path in the UI was storing `adapterConfig.command`. As a result, changing the command in the UI did not reliably affect runtime behavior. In real use, the adapter could still fall back to the default `hermes` binary. This showed up clearly in setups where Hermes is launched through a wrapper command rather than installed directly on the host. ## What changed - switched the Hermes local UI adapter to the Hermes-specific config builder - updated the configuration form to read and write `hermesCommand` for `hermes_local` - preserved the override correctly in the test-environment path - added server-side normalization from legacy `command` to `hermesCommand` ## Compatibility The server-side normalization keeps older saved agent configs working, including configs that still store the value under `command`. ## Validation Validated against a Docker-based Hermes workflow using a local wrapper exposed through a symlinked command: - `Command = hermes-docker` - environment test respects the override - runs no longer fall back to `hermes` Typecheck also passed for both UI and server. Co-authored-by: NoronhaH <NoronhaH@users.noreply.github.com>
## Thinking Path > - Paperclip orchestrates AI agents through issue-driven heartbeats, checkouts, and wake scheduling. > - This change sits in the server heartbeat and issue services that decide which queued runs are allowed to start. > - Before this branch, queued heartbeats could be selected even when their issue still had unresolved blocker relationships. > - That let blocked descendant work compete with actually-ready work and risked auto-checking out issues that were not dependency-ready. > - This pull request teaches the scheduler and checkout path to consult issue dependency readiness before claiming queued runs. > - It also exposes dependency readiness in the agent inbox so agents can see which assigned issues are still blocked. > - The result is that heartbeat execution follows the DAG of blocked dependencies instead of waking work out of order. ## What Changed - Added `IssueDependencyReadiness` helpers to `issueService`, including unresolved blocker lookup for single issues and bulk issue lists. - Prevented issue checkout and `in_progress` transitions when unresolved blockers still exist. - Made heartbeat queued-run claiming and prioritization dependency-aware so ready work starts before blocked descendants. - Included dependency readiness fields in `/api/agents/me/inbox-lite` for agent heartbeat selection. - Added regression coverage for dependency-aware heartbeat promotion and issue-service participation filtering. ## Verification - `pnpm run preflight:workspace-links` - `pnpm exec vitest run server/src/__tests__/heartbeat-dependency-scheduling.test.ts server/src/__tests__/issues-service.test.ts` - On this host, the Vitest command passed, but the embedded-Postgres portions of those files were skipped because `@embedded-postgres/darwin-x64` is not installed. ## Risks - Scheduler ordering now prefers dependency-ready runs, so any hidden assumptions about strict FIFO ordering could surface in edge cases. - The new guardrails reject checkout or `in_progress` transitions for blocked issues; callers depending on the old permissive behavior would now get `422` errors. - Local verification did not execute the embedded-Postgres integration paths on this macOS host because the platform binary package was missing. > I checked `ROADMAP.md`; this is a targeted execution/scheduling fix and does not duplicate planned roadmap feature work. ## Model Used - OpenAI Codex via the Paperclip `codex_local` adapter in this workspace. Exact backend model ID is not surfaced in the runtime here; tool-enabled coding agent with terminal execution and repository editing capabilities. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
Auto-generated lockfile refresh after dependencies changed on master. This PR only updates pnpm-lock.yaml. Co-authored-by: lockfile-bot <lockfile-bot@users.noreply.github.com>
## Thinking Path
> - Paperclip orchestrates AI agents through a control-plane repo that
relies on GitHub Actions as part of its release and verification safety
net.
> - The PR workflow in `.github/workflows/pr.yml` is the core CI path
protecting pull requests before merge.
> - Baseline measurement work in [PAPA-335](/PAPA/issues/PAPA-335)
showed the old single `verify` job was the critical-path bottleneck,
with general tests and build serialized together.
> - Follow-up implementation in [PAPA-338](/PAPA/issues/PAPA-338) and
[PAPA-339](/PAPA/issues/PAPA-339) split that work into parallel lanes
and removed redundant clean-runner prebuild work.
> - [PAPA-340](/PAPA/issues/PAPA-340) now needs real post-change PR
workflow evidence, not local inference, to compare against the May 15,
2026 baseline and decide whether phase-2 work is still justified.
> - This pull request publishes the already-implemented CI speedup
branch so GitHub can run the actual `PR` workflow against it.
> - The benefit is that CI timing decisions are based on measured runs
from the exact workflow shape we intend to ship.
## What Changed
- Split the PR workflow so `policy` fans out into separate `Typecheck +
Release Registry`, grouped `General tests`, and `Build` jobs.
- Kept the serialized server matrix, canary dry run, and e2e jobs intact
while removing the old monolithic `verify` bottleneck.
- Reworked grouped general-test execution in
`scripts/run-vitest-stable.mjs` so the workflow can run balanced
non-serialized lanes.
- Replaced redundant clean-runner prebuild gates with the idempotent
`ensure-build-deps` path used by the relevant CI entrypoints.
## Verification
- `ruby -e "require 'yaml'; YAML.load_file('.github/workflows/pr.yml');
puts 'yaml-ok'"`
- `node scripts/run-vitest-stable.mjs --mode general --dry-run`
- `node scripts/run-vitest-stable.mjs --mode general --group
general-server --dry-run`
- `node scripts/run-vitest-stable.mjs --mode general --group
general-workspaces-a --dry-run`
- `node scripts/run-vitest-stable.mjs --mode general --group
general-workspaces-b --dry-run`
- `pnpm test:run:general -- --group general-workspaces-b`
- `pnpm test:run:general -- --group general-workspaces-a`
- `pnpm test:run:general -- --group general-server`
- `pnpm run typecheck:build-gaps`
- `pnpm --filter @paperclipai/plugin-hello-world-example typecheck`
## Risks
- Required-check and branch-protection settings may still reference the
old single `verify` job name.
- Parallel CI lanes can expose hidden ordering assumptions or
clean-runner bootstrap gaps that local grouped dry-runs did not surface.
- Because the branch is behind current `master`, merge conflicts or
unrelated upstream drift could affect the measured runtime until the
branch is rebased.
> Checked `ROADMAP.md`; this work is CI throughput maintenance for the
existing PR verification path, not duplicate feature work.
## Model Used
- OpenAI Codex via Paperclip `codex_local`, GPT-5-class coding agent
with repository read/write, shell execution, and GitHub CLI/tool use.
The runtime does not expose a more specific backend model ID in-session.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [ ] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
…aperclipai#6142) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The `grok-local` adapter streams reasoning text to the issue "Working..." panel as the grok CLI runs > - The `grok` CLI's `--output-format streaming-json` mode silently drops the `\n` separator between reasoning turns around tool calls > - Consecutive `thought` chunks (e.g. `` "`" `` followed by `"The"`) arrive with no intervening whitespace event, so the UI's `delta: true` concatenator merged them into run-on text like `"…planningGreat, now I have the issue descriptionThe only co"` > - This PR adds a small turn-boundary helper that detects sentence boundaries in the upstream `thought` stream and inserts a single `\n` only when the previous chunk ended with sentence punctuation (or a balanced closing backtick) AND the next chunk begins a new uppercase sentence > - The benefit is readable streaming reasoning in the UI without changing how completed messages are stored ## What Changed - Added `packages/adapters/grok-local/src/shared/turn-boundary.ts` with per-stream state (last chunk + backtick parity) and a `restoreTurnBoundary()` helper that inserts `\n` only between balanced, sentence-terminated `thought` chunks - Wired the helper into `parseGrokJsonl` (server) and added a new `createGrokStdoutParser` factory used by `grokLocalUIAdapter` for the live "Working..." panel - Added focused tests in `shared/turn-boundary.test.ts`, plus regression assertions in `server/parse.test.ts` and `ui/parse-stdout.test.ts` ## Verification - `pnpm --filter @paperclip/grok-local test` — 23/23 adapter tests pass - `pnpm --filter @paperclip/grok-local typecheck` and UI typecheck — clean - Replayed an actual broken `grok 0.1.210` stream from the report; previously-merged boundaries (`` `ls`The ``, `returned:Confirmed`) now render with a separating newline; chunks inside un-closed backtick spans are left alone ## Risks - Low risk. Boundary insertion only fires when prev ends with `.`/`!`/`?`/balanced `` ` `` and next begins with an uppercase ≥2-char word, with no whitespace on either side. Worst case: a rare missed split or a misplaced newline inside reasoning — both purely cosmetic and confined to the live streaming panel. ## Model Used - Claude Opus 4.7 (claude-opus-4-7), Anthropic, extended thinking + tool use via Claude Code ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - Stable releases need a reviewer-readable changelog artifact that summarizes what changed for operators and contributors. > - The last stable release tag is `v2026.513.0`, and the requested release date is 2026-05-17. > - The release changelog skill maps that date to stable version `2026.517.0` and requires the range `v2026.513.0..origin/master`. > - I reviewed the commits, PR metadata, migration/API surfaces, and contributor attribution in that range. > - This pull request adds the `releases/v2026.517.0.md` changelog for human release sign-off. > - The benefit is a stable release note artifact that is ready to review before publishing the release. ## What Changed - Added `releases/v2026.517.0.md` for the 2026-05-17 stable release. - Summarized user-facing highlights, improvements, fixes, and contributor attribution from `v2026.513.0..origin/master`. - Omitted Breaking Changes and Upgrade Guide sections after checking for destructive migrations, removed API surfaces, and breaking-change commit signals. ## Verification - `./scripts/release.sh stable --date 2026-05-17 --print-version` -> `2026.517.0`. - `git tag --list 'v*' --sort=-version:refname | head -10` confirmed `v2026.513.0` is the latest stable tag. - `git log v2026.513.0..origin/master --oneline --no-merges` reviewed the 16 release-range commits. - `git diff --name-only v2026.513.0..origin/master -- .changeset` returned no changeset files. - `git log v2026.513.0..origin/master --format='%s' | rg -n 'BREAKING CHANGE|BREAKING:|^[a-z]+!:' || true` returned no breaking-change signals. - `git diff --name-only v2026.513.0..origin/master -- packages/db/src/migrations packages/db/src/schema server/src/routes server/src/api server/src` reviewed the DB/API/server touchpoints; only an additive document-lock migration appeared in the DB schema/migration path. - `test -f releases/v2026.517.0.md` passed. - `rg -n -- '-canary|canary/' releases/v2026.517.0.md || true` returned no canary filename/title language. - `git diff --cached --check` passed before commit. ## Risks - Low risk: docs-only release changelog addition. - Changelog grouping is editorial; reviewers may want wording or prioritization changes before release publication. - Contributor attribution intentionally excludes bot accounts and Paperclip founders from the Contributors section per the release changelog skill. > Checked [`ROADMAP.md`](ROADMAP.md); this is release documentation, not new roadmap-level core feature work. ## Model Used - OpenAI Codex, GPT-5 coding agent via Paperclip `codex_local`, with shell, git, GitHub CLI, and repository file editing enabled. Exact backend sub-version and context window were not surfaced by the Paperclip runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
## Thinking Path > - Paperclip publishes its CLI, server, UI, and adapter packages through the shared release workflow. > - Canary releases are driven by the GitHub release workflow on pushes to `master`. > - The release workflow does not publish every public package automatically; it uses `scripts/release-package-manifest.json` as the CI enrollment source of truth. > - The Grok adapter is public and already present in the manifest, but its `publishFromCi` flag was still disabled. > - Because of that flag, normal canary publishes skipped `@paperclipai/adapter-grok-local` even when the main package received a canary. > - This pull request enables Grok in the release manifest so future canary runs include it. > - The benefit is that Grok adapter canaries stay aligned with the rest of the package release set. ## What Changed - Set `packages/adapters/grok-local` / `@paperclipai/adapter-grok-local` to `publishFromCi: true` in `scripts/release-package-manifest.json`. ## Verification - `node ./scripts/release-package-map.mjs check` - `node ./scripts/release-package-map.mjs list | grep '@paperclipai/adapter-grok-local'` - `pnpm test:release-registry` ## Risks - Low risk: this is a release manifest-only change. - Future canary releases will attempt to publish `@paperclipai/adapter-grok-local`; this assumes the package remains publishable and trusted publishing/package access are correctly configured for the existing npm package. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5-based coding agent with shell, git, and GitHub tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>
…i#6152) ## Summary Adds `.agents/skills/release-changelog-discord-message/SKILL.md` — the companion to `.agents/skills/release-changelog/`. The changelog skill produces `releases/vYYYY.MDD.P.md`; this one turns that into the single copy-pasteable Discord post in dotta's voice and attaches it as the `discord_announcement` document on the release issue. Includes: - dotta's instructions near-verbatim from PAP-3687 ("This is for discord — try to follow my format. If I have a section where I think about the future, pull from recent issues we're working on etc.") - The three previous Discord announcements (v2026.403.0, v2026.416.0, v2026.427.0) **verbatim** as canonical voice references - Format template + language tips (ALL CAPS for excitement, emoji-shortcode-per-highlight, first-person voice, opener/closer brand bookends) - Workflow tied to the existing release issue + `discord_announcement` document - Review checklist (version match, contributor list dedup, real "what's next" themes, no invented work) Resolves PAP-9524. ## Test plan - [ ] dotta eyeballs voice + structure against the three prior posts - [ ] On the next release, run this skill end-to-end and confirm the `discord_announcement` document on the release issue matches the format Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Scheduled routines are the control-plane path for recurring agent work. > - Routines already had dispatch/history, but their runtime environment did not carry routine-owned secret bindings through execution. > - Operators need routine-specific secrets that can override project/agent env without exposing secret values in history, logs, or access events. > - This pull request adds the routine env runtime contract, wires it into execution, and makes the routine UI/history surfaces show safe secret metadata. > - The benefit is that routine executions can use scoped secret refs predictably while preserving company boundaries and auditability. ## What Changed - Added routine env persistence/runtime support, including `routines.env`, `routine_runs.routine_revision_id`, revision snapshots, and idempotent migration `0086_routine_env_runtime_contract`. - Resolved routine env during heartbeat adapter config assembly with precedence `agent < project < routine` and secret access events recorded against the routine consumer. - Added secret binding synchronization for routine create/update/restore flows and guarded cross-company, missing, disabled, and deleted secret cases. - Added a Secrets tab to routine detail, env/secret history diff rendering, and Storybook coverage for the new UI states. - Added server/UI regression tests, including an embedded-Postgres QA path for routine secret execution and restore behavior. - Updated implementation/database docs for routine env and secret-binding behavior. ## Verification - `pnpm install --frozen-lockfile` after rebasing onto `public-gh/master` to refresh workspace links for the newly-added upstream Grok adapter package. - `pnpm exec vitest run server/src/__tests__/heartbeat-project-env.test.ts server/src/__tests__/routines-service.test.ts server/src/__tests__/secrets-service.test.ts server/src/__tests__/qa-routine-secrets-e2e.test.ts ui/src/components/RoutineHistoryTab.test.tsx` passed: 5 files, 92 tests. - `pnpm -r typecheck` passed across the workspace. - `pnpm build` passed. Vite emitted the existing large-chunk/dynamic-import warnings. - UI screenshots were captured locally during QA in `artifacts/pap-9521/` and `artifacts/pap-9522/`; generated screenshots are not committed to avoid adding binary artifacts to the repo. ## Risks - Migration risk is limited by `IF NOT EXISTS` guards for the new columns, FK, and index, and the migration is ordered as `0086` immediately after upstream `0085`. - Runtime behavior changes env precedence for routine executions by adding routine env as the highest-precedence layer; tests cover agent/project/routine precedence. - Secret handling is security-sensitive; tests cover value-free manifests/events/errors, disabled/missing/deleted secrets, and cross-company rejection. - UI history now renders routine env/secret diffs; tests and Storybook stories cover the main rendering paths. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, with shell/tool use and medium reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip is the control plane for autonomous AI companies, so agent work needs visible ownership, recovery, and operator controls. > - This local branch had accumulated several related control-plane reliability and operator-experience fixes across recovery actions, watchdog folding, model-profile defaults, mentions, markdown editing, plugin launchers, and small UI polish. > - The branch needed to be converted into a PR against the current `origin/master` without losing dirty work or including lockfile/workflow churn. > - The safest standalone shape is a single rollup PR because the recovery/server/UI files overlap heavily across the local commits and splitting would create avoidable conflicts. > - This pull request replays the local branch onto latest `origin/master`, preserves the uncommitted work as logical commits, and adds a Zod 4 validator compatibility fix found during verification. > - The benefit is that the May 17 local branch can be reviewed and merged as one coherent, conflict-free branch under the 100-file Greptile limit. ## What Changed - Rebased the local May 17 branch work onto current `origin/master` in a dedicated worktree. - Preserved and committed previously dirty changes for recovery retry handling, plugin/sidebar launcher polish, and `.herenow` ignores. - Added recovery-action behavior for returning source issues to `todo` when retrying source-scoped recovery. - Included the existing local recovery/liveness/watchdog fold, Codex cheap-profile, markdown/mention, duplicate-agent, and UI polish commits from the branch. - Normalized shared validator `z.record(...)` schemas to explicit string-key records for Zod 4 compatibility. - Confirmed the PR has no `pnpm-lock.yaml` or `.github/workflows/*` changes and stays below the 100-file Greptile limit. ## Verification - `pnpm install --frozen-lockfile --ignore-scripts` - `npm run install` in `node_modules/.pnpm/sqlite3@5.1.7/node_modules/sqlite3` to build the local native sqlite3 binding after installing with scripts disabled - `pnpm exec vitest run packages/shared/src/validators/issue.test.ts packages/shared/src/project-mentions.test.ts packages/adapter-utils/src/server-utils.test.ts server/src/__tests__/heartbeat-model-profile.test.ts server/src/__tests__/issue-recovery-actions.test.ts server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts server/src/__tests__/heartbeat-active-run-output-watchdog.test.ts server/src/__tests__/plugin-local-folders.test.ts ui/src/components/IssueRecoveryActionCard.test.tsx ui/src/components/Sidebar.test.tsx ui/src/components/SidebarAccountMenu.test.tsx ui/src/components/IssueProperties.test.tsx ui/src/components/MarkdownEditor.test.tsx ui/src/components/MarkdownBody.test.tsx ui/src/lib/duplicate-agent-payload.test.ts ui/src/pages/Routines.test.tsx` - First pass: 13 files passed with 201 passing tests; 3 server files failed before sqlite3 native binding was built. - After rebuilding sqlite3: `server/src/__tests__/heartbeat-model-profile.test.ts`, `server/src/__tests__/issue-recovery-actions.test.ts`, and `server/src/__tests__/heartbeat-active-run-output-watchdog.test.ts` passed/loaded; embedded Postgres tests were skipped by the local host guard. - `pnpm --filter @paperclipai/shared typecheck` - `pnpm --filter @paperclipai/adapter-utils typecheck` - `pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck` ## Risks - Medium risk: this is a broad rollup PR across recovery semantics, server tests, shared validators, and UI surfaces. - Some embedded Postgres tests skipped locally due the host guard, so CI should provide the stronger database-backed signal. - UI changes were covered by component tests, but no browser screenshot was captured in this PR creation pass. - This branch may overlap with existing recovery/liveness PR work; merge this PR independently or restack/close overlapping branches rather than merging duplicate implementations together. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5-based coding agent, tool-enabled local repository and GitHub workflow, medium reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Operators manage per-company secrets through the Secrets page in the web UI > - A long secret value pasted into the "New secret" textarea blew out the form's width, which pushed the Create/Cancel buttons off-screen and made the form unusable > - Root cause: the shadcn `Textarea` primitive sets `w-full` but does not constrain `min-width`, so a flex parent honors the textarea's intrinsic content width when a long unbreakable string is present > - This pull request adds `min-w-0 max-w-full` to the shared `Textarea` primitive and `min-w-0 overflow-x-hidden break-all` on the secret-value usage so a long token wraps inside the form bounds > - The benefit is the Create/Cancel buttons stay reachable regardless of pasted token length, and every other `Textarea` consumer also gets the flexbox-friendly width constraint ## What Changed - `ui/src/components/ui/textarea.tsx`: added `min-w-0 max-w-full` to the base shadcn `Textarea` so it cannot exceed its flex parent - `ui/src/pages/Secrets.tsx`: added `min-w-0 overflow-x-hidden break-all` on the new-secret value `Textarea` so long opaque tokens wrap instead of pushing the form - `ui/src/pages/Secrets.render.test.tsx`: new regression test that opens the New Secret dialog and asserts the value textarea carries the width-constraint classes ## Verification - `cd ui && npx vitest run src/pages/Secrets.render.test.tsx` — 3/3 pass - Manual: open the Secrets page, click "New secret", paste a long unbroken string (e.g. a 500-char token) into the value field. The form stays within its dialog and the Create/Cancel buttons remain in view. Before: <img width="1772" height="1432" alt="image" src="https://github.com/user-attachments/assets/cb31a290-f82a-41dc-9346-91d18cbb5911" /> After: <img width="672" height="734" alt="Screenshot 2026-05-17 at 5 39 38 PM" src="https://github.com/user-attachments/assets/a08800c2-b09b-43be-b0e8-114d9149b8f5" /> After: the value field wraps with `break-all` inside the dialog; Create/Cancel stay clickable. Covered by the new render test which asserts `min-w-0`, `overflow-x-hidden`, and `break-all` are present on `#new-secret-value`. ## Risks - Low risk. The base `Textarea` change adds `min-w-0 max-w-full`, which only affects layouts where a textarea was previously allowed to grow past its parent — those cases were already buggy. `break-all` on the secret-value textarea is the right behavior for opaque tokens; it would be wrong for prose, but this field is explicitly a secret token. ## Model Used - Provider: Anthropic Claude - Model: claude-opus-4-7 (Opus 4.7) - Mode: standard Claude Code agent, tool use enabled ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge
…erclipai#6240) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Each working tree gets an isolated Paperclip instance; the CLI's `paperclip worktree init` is what bootstraps that instance and writes `<repo>/.paperclip/config.json` + `.env` > - When `--force` was passed, the init path tried to "start clean" by recursively removing the entire `<repo>/.paperclip/` directory before rewriting those two files > - But `<repo>/.paperclip/` also holds `worktrees/`, which contains every repo-managed worktree checkout (70+ on this machine). The recursive rm silently nuked all of them. > - This PR narrows the `--force` reset so it only deletes the two files it's about to rewrite (`config.json`, `.env`), instead of wiping the whole `repoConfigDir` > - It also adds a regression test that drops a sentinel file into `<repoConfigDir>/worktrees/` and asserts it survives a `--force` init > - The benefit is that `worktree init --force` becomes safe to run from inside the main repo without destroying every sibling worktree checkout ## What Changed - `cli/src/commands/worktree.ts`: in the `--force` branch of `runWorktreeInit`, replace `rmSync(paths.repoConfigDir, { recursive: true, force: true })` with targeted removals of `paths.configPath` and `paths.envPath`. `paths.instanceRoot` removal is unchanged — that path is per-instance and safe to wipe. - `cli/src/__tests__/worktree.test.ts`: new regression test that seeds a fake `worktrees/<name>/` checkout inside the repo's `.paperclip/` and verifies `runWorktreeInit({ force: true, ... })` does not delete it. ## Verification - `pnpm --filter @paperclip/cli test -- worktree` — the new regression test fails on the old code and passes on the fix - Manual: from a repo checkout, `npx paperclipai worktree init --force …` no longer removes `<repo>/.paperclip/worktrees/`; only `config.json` and `.env` are rewritten ## Risks - Low. The change strictly narrows what `--force` removes. Any caller that depended on `--force` also wiping unrelated files under `<repo>/.paperclip/` (there shouldn't be any — it's documented as just config + env) would see those files persist. `instanceRoot` cleanup is unchanged. ## Model Used - Claude (Anthropic), model `claude-opus-4-7`, ~200K context, extended-thinking + tool-use enabled, run via the Paperclip `claude_local` adapter. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots (N/A — CLI-only fix) - [x] I have updated relevant documentation to reflect my changes (no doc surface affected) - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Operators need to inspect what agents changed inside execution and project workspaces. > - The existing workspace detail views did not provide a first-party rich diff surface for staged, unstaged, head, renamed, binary, oversized, and untracked changes. > - The plugin system is the intended extension point for optional rich UI surfaces. > - This pull request adds a workspace diff plugin plus host services and shared contracts so Changes tabs can render workspace diffs through plugin slots. > - The diff-renderer dependency should stay owned by the plugin package rather than the core UI app. > - The dependency surface must stay aligned with repository PR policy, including intentionally omitting `pnpm-lock.yaml` from the PR. > - The benefit is a more reviewable workspace surface without hard-coding the renderer into every page. ## What Changed - Added `@paperclipai/plugin-workspace-diff`, including diff normalization, plugin manifest/worker/UI entrypoints, and focused plugin tests. - Kept `@pierre/diffs` scoped to `@paperclipai/plugin-workspace-diff`; removed the core UI lab diff-renderer surface and direct UI package dependency. - Added shared workspace diff types and validators, plus plugin SDK surface for workspace diff host services. - Added server workspace diff service support and route coverage for execution/project workspace diff flows. - Wired Execution Workspace and Project Workspace Changes tabs to load the diff plugin, including loading/error fallback behavior. - Added UI tests and fixtures for the Changes tabs and plugin bridge behavior. - Added the new plugin package manifest to the Docker deps stage so PR policy can validate dependency coverage. - Addressed review hardening around empty untracked patches, workspace path exposure, project workspace read capability checks, and default base refs. ## Verification - `pnpm --filter @paperclipai/plugin-workspace-diff test` - `pnpm exec vitest run packages/shared/src/validators/workspace-diff.test.ts server/src/__tests__/workspace-diff-service.test.ts ui/src/pages/ProjectWorkspaceDetail.test.tsx ui/src/pages/ExecutionWorkspaceDetail.test.tsx` - `pnpm exec vitest run ui/src/plugins/bridge.test.ts server/src/__tests__/workspace-runtime-routes-authz.test.ts` - `pnpm --filter @paperclipai/shared typecheck` - `pnpm --filter @paperclipai/plugin-workspace-diff typecheck` - `pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck` - `node ./scripts/check-docker-deps-stage.mjs` - Browser screenshot captured from the local worktree dev server: https://files.catbox.moe/ofdpsp.png - Confirmed branch is rebased onto `public-gh/master`, `.github/workflows/pr.yml` is not included in the PR diff, `ui/package.json` is not included in the PR diff, and `pnpm-lock.yaml` is not included in the PR diff. ## Risks - Medium UI integration risk: the Changes tab depends on the plugin slot and host diff service path. - Medium dependency risk: this adds `@pierre/diffs` in the plugin package, but `pnpm-lock.yaml` is intentionally omitted per packaging instructions because repository automation manages lockfile updates. - Current CI blocker: downstream frozen installs fail until the repository policy path for new plugin package dependencies is chosen. - Diff rendering edge cases are covered for common working-tree and head diff states, but very large repositories may still expose performance limits. - No migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 class coding model, tool-enabled local execution environment. Exact context window was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
Auto-generated lockfile refresh after dependencies changed on master. This PR only updates pnpm-lock.yaml. Co-authored-by: lockfile-bot <lockfile-bot@users.noreply.github.com>
) ## Summary - Removes the amber "Planning" pill from inbox / issue-list rows in `IssueRow` - Updates the focused IssueRow test to assert the badge is no longer rendered - Per [PAP-9691](https://paperclip.ing/PAP/issues/PAP-9691): user just doesn't want to see the badge in list rows The underlying `issue.workMode === "planning"` data, the issue detail composer toggle, and the server/plugin/heartbeat work-mode contract introduced in paperclipai#5353 are all untouched. Planning mode still functions; the list-row indicator is just gone. ## Test plan - [x] `pnpm exec vitest run --project @paperclipai/ui ui/src/components/IssueRow.test.tsx` (11 passed) - [ ] Visual: open `/PAP/inbox` with a planning-mode issue assigned and confirm no amber Planning pill on the row 🤖 Generated with [Claude Code](https://claude.com/claude-code) --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
…i#6261) ## Thinking Path <!-- Required. Trace your reasoning from the top of the project down to this specific change. Start with what Paperclip is, then narrow through the subsystem, the problem, and why this PR exists. Use blockquote style. Aim for 5-8 steps. See CONTRIBUTING.md for full examples. --> > - Paperclip orchestrates AI agents for zero-human companies. > - The plugin system is how optional capabilities extend the control plane without adding hidden core behavior. > - Plugin authors need accurate guidance for the current managed capabilities model. > - The existing docs under-described managed skills and the routine-first pattern for durable plugin automation. > - Content-oriented plugins such as LLM Wiki should model recurring work with visible managed agents, projects, routines, and skills. > - This pull request aligns the authoring guide, local development guide, and longer plugin spec with that model. > - The benefit is clearer plugin guidance that preserves Paperclip visibility, budgets, pause controls, and audit trails. ## What Changed <!-- Bullet list of concrete changes. One bullet per logical unit. --> - Documented plugin-managed skills alongside managed agents, projects, and routines. - Added guidance for content-oriented plugins to use managed projects, agents, skills, and routines instead of private daemon-like state. - Updated the manifest/spec examples and capability lists for current plugin-managed surfaces. - Clarified when to use managed routines instead of plugin runtime jobs for board-visible recurring work. - Added a short local plugin development note pointing authors toward routine-first automation. - Addressed Greptile docs feedback by marking top-level `launchers` as legacy and removing a redundant `slug` from the managed skill example. ## Verification <!-- How can a reviewer confirm this works? Include test commands, manual steps, or both. For UI changes, include before/after screenshots. --> - `git diff --check public-gh/master...HEAD` - Reviewed `ROADMAP.md`; this is docs alignment for the completed plugin system milestone and does not add roadmap-level core feature work. - Greptile Review: success on the latest head; `3 files reviewed, 0 comments added` after follow-up fixes. - GitHub PR checks are green on the latest head, including Build, Typecheck + Release Registry, General tests, serialized server suites, e2e, Canary Dry Run, policy, Snyk, and aggregate `verify`. ## Risks <!-- What could go wrong? Mention migration safety, breaking changes, behavioral shifts, or "Low risk" if genuinely minor. --> - Low risk: documentation-only changes. - Main risk is documentation drift if the plugin API changes again before these docs are reviewed. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected - check the roadmap first. See `CONTRIBUTING.md`. ## Model Used <!-- Required. Specify which AI model was used to produce or assist with this change. Be as descriptive as possible - include: • Provider and model name (e.g., Claude, GPT, Gemini, Codex) • Exact model ID or version (e.g., claude-opus-4-6, gpt-4-turbo-2024-04-09) • Context window size if relevant (e.g., 1M context) • Reasoning/thinking mode if applicable (e.g., extended thinking, chain-of-thought) • Any other relevant capability details (e.g., tool use, code execution) If no AI model was used, write "None — human-authored". --> - OpenAI Codex, GPT-5 coding agent with shell and GitHub connector tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path > - Paperclip orchestrates AI agents through company-scoped control-plane workflows and extensible runtime integrations. > - Sandbox providers are part of that extension surface because they let agents execute isolated work without baking each provider into the core server. > - Modal already offers managed sandboxes with filesystem, process, timeout, and networking controls that map onto Paperclip's sandbox provider contract. > - The repo did not have a Modal provider plugin, so teams wanting Modal-backed sandboxes had no first-party integration path. > - This pull request adds a standalone `packages/plugins/sandbox-providers/modal` plugin that implements the provider contract, worker entrypoint, docs, and tests. > - The benefit is that Modal can now be installed as a provider plugin without expanding the core control-plane surface area. ## What Changed - Added a new `packages/plugins/sandbox-providers/modal` package with the plugin manifest, worker entrypoint, and exported plugin surface. - Implemented Modal-backed sandbox lifecycle support for creation, command execution, file operations, networking options, termination, and metadata translation. - Added focused Vitest coverage for config validation, env handling, lifecycle flows, networking behavior, and error mapping. - Documented installation, configuration, and usage requirements in the plugin README. - Removed misleading `MODAL_TOKEN_*` fallback behavior so authentication relies on supported Modal credentials only. ## Verification - `pnpm -r typecheck` - `pnpm test:run` - `pnpm build` - `cd packages/plugins/sandbox-providers/modal && pnpm test` ## Risks - Low to medium risk: this is isolated to a new plugin package, but runtime behavior still depends on live Modal account credentials and service-side sandbox semantics. - Modal's current docs target a newer Node baseline than the repo default, so the first live install should confirm credential loading and sandbox startup behavior in a real Modal workspace. - No UI or schema changes are included in this PR. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex via Paperclip `codex_local` agent (GPT-5-class Codex coding model; exact backend model ID is not exposed by the runtime), with tool use, shell execution, and code-editing capabilities enabled. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
…t sandboxes (paperclipai#6289) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Companies provision execution environments via sandbox provider plugins (Modal, Daytona, E2B, etc.) > - At provision time, the server probes each plugin's environment / sandbox-provider driver over a worker RPC to validate config > - `workerManager.call()` defaults to a 30s timeout, but cold-start sandboxes — Modal in particular — take ~31s to boot > - Result: every fresh Modal environment probe fails with a worker RPC timeout, blocking environment provisioning end-to-end > - This PR passes `timeoutMs=120_000` to the two probe call sites (`probePluginEnvironmentDriver`, `probePluginSandboxProviderDriver`) > - The benefit is Modal — and any future provider with similar cold-start latency — can be successfully probed without false-negative timeout failures ## What Changed - Pass `timeoutMs=120_000` to `workerManager.call()` in `probePluginEnvironmentDriver` (`server/src/services/plugin-environment-driver.ts`) - Pass `timeoutMs=120_000` to `workerManager.call()` in `probePluginSandboxProviderDriver` (same file) ## Verification - Targeted unit tests: ``` pnpm --filter @paperclipai/server exec vitest run \ src/__tests__/plugin-environment-driver-seam.test.ts \ src/__tests__/heartbeat-plugin-environment.test.ts ``` 5/5 tests pass. - Manual: provision a fresh Modal sandbox environment from the UI. Previously failed with a worker RPC timeout at ~30s; now succeeds. ## Risks - Low risk. The change only raises a per-call timeout (default 30s → explicit 120s) on two probe call sites. Fast providers are unaffected since probe completes well below either bound. Worst case: a genuinely hung worker now blocks the probe for 120s instead of 30s before giving up — still bounded, and only on the provision-time probe path (not the heartbeat/run path). ## Model Used - Provider: Anthropic - Model: `claude-opus-4-7` (Claude Opus 4.7, 1M context window) - Capabilities: extended thinking, tool use, code execution - Scope of AI assistance: the underlying 4-line code change was human-authored by the committer; this PR (verification commands, message structuring, and submission) was prepared with Claude per the `paperclip-dev` skill. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [ ] I have added or updated tests where applicable — n/a, this is a per-call timeout configuration bump; existing tests cover the probe call path - [x] If this change affects the UI, I have included before/after screenshots — n/a, no UI change - [ ] I have updated relevant documentation to reflect my changes — n/a, the timeout is an internal worker-RPC tuning value with no documented contract - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip keeps its core release process declarative through
`scripts/release-package-manifest.json`, which decides which packages CI
is allowed to publish.
> - The Modal sandbox provider now exists as a first-party plugin
package under `packages/plugins/sandbox-providers/modal`.
> - The original Modal PR intentionally left `publishFromCi` disabled
until the package had been published and the registry bootstrap concern
was cleared.
> - The latest reviewer comment confirms that bootstrap step is
complete, so the remaining gap is only release automation configuration.
> - This pull request flips the Modal manifest entry to `publishFromCi:
true` so future CI-driven releases can publish
`@paperclipai/plugin-modal` the same way the other releasable packages
do.
> - The benefit is that Modal releases no longer require a manual
exception in the release pipeline.
## What Changed
- Updated the `@paperclipai/plugin-modal` entry in
`scripts/release-package-manifest.json` to set `publishFromCi` to
`true`.
## Verification
- Ran `node -e 'const
m=require("./scripts/release-package-manifest.json"); const
e=m.find(x=>x.name==="@paperclipai/plugin-modal");
if(!e||e.publishFromCi!==true){throw new Error("modal publishFromCi not
true")}; console.log(JSON.stringify(e))'`
## Risks
- Low risk. This only changes release-manifest metadata; the main
failure mode is CI attempting to publish the Modal package before
registry credentials or release conditions are ready.
## Model Used
- OpenAI Codex local agent, GPT-5-based coding model in the Codex
runtime (exact deployment model ID not exposed in this workspace), with
tool use and shell execution.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Human operators create and edit issues through modal-heavy board UI workflows. > - The new-issue dialog embeds markdown editors that render autocomplete menus through body-level portals. > - Radix Dialog treats those portal clicks as outside-dialog pointer events and prevents their default behavior. > - That prevention made completion items hard or impossible to select from inside the new-issue dialog. > - This pull request marks the markdown editor floating autocomplete menu as allowed dialog-external UI and extends the dialog outside-pointer handler to preserve those interactions. > - The benefit is that users can click/tap autocomplete completions while keeping the existing modal behavior intact. ## What Changed - Added a stable `data-paperclip-floating-ui` marker and explicit pointer event handling to the markdown editor mention/autocomplete portal. - Updated the new issue dialog outside-pointer guard so editor autocomplete portals are handled like Radix popover portals. - Added regression coverage for markdown editor portal markup and new issue dialog completion selection behavior. ## Verification - `pnpm exec vitest run ui/src/components/MarkdownEditor.test.tsx ui/src/components/NewIssueDialog.test.tsx` passed: 2 files, 38 tests. - Confirmed the branch is rebased onto current `public-gh/master` before opening this PR. - Confirmed the diff does not include `pnpm-lock.yaml` or `.github/workflows` changes. ## Risks - Low risk. The change is scoped to allowing pointer events from known body-level UI portals while keeping other outside-dialog pointer events under Radix Dialog control. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent with repository tool use and local command execution. Exact hosted context window is not surfaced in this runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Screenshot note: this is an interaction/event-handling fix with no visible UI change; verification is covered by the focused regression tests above. Co-authored-by: Paperclip <noreply@paperclip.ing>
…ipai#6338) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Releases ship via a Docker image built in the `build-and-push` CI workflow > - A recent change added `plugin-workspace-diff` to the pnpm workspace; its `postinstall` hook calls `scripts/link-plugin-dev-sdk.mjs` > - The Dockerfile's `deps` stage runs `pnpm install` before the full repo is copied, so the script was missing and `pnpm install` failed with `Cannot find module` > - Sandbox-provider plugins have the same hook but are excluded from the pnpm workspace, so they were unaffected — this was specific to `plugin-workspace-diff` > - This pull request copies `scripts/link-plugin-dev-sdk.mjs` into the `deps` stage alongside the package.json files > - The benefit is restoring the `build-and-push` CI workflow with a minimal one-line change ## What Changed - Add `COPY scripts/link-plugin-dev-sdk.mjs scripts/` to the Dockerfile's `deps` stage so the `plugin-workspace-diff` postinstall hook succeeds during `pnpm install`. ## Verification - Reproduces the original failure on `master` by running `docker build --target deps .` — fails at `pnpm install` with `Cannot find module '/app/scripts/link-plugin-dev-sdk.mjs'`. - With this patch, `docker build --target deps .` completes successfully through the `deps` stage. - CI `build-and-push` job (previously failing on https://github.com/paperclipai/paperclip/actions/runs/26055610103/job/76602841176) should now pass. ## Risks - Low risk. One-line addition that copies a single script earlier in the Docker build. No runtime behavior changes, no app code changes, no schema changes. ## Model Used - Claude (Anthropic), model ID `claude-opus-4-7`, extended thinking enabled, 200K context. Used via Claude Code CLI with tool use (Bash, Read, Edit, Grep) running inside the Paperclip agent harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing>
…lds (paperclipai#6339) ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Plugin authors expose configuration via JSON schemas, including secret fields marked `format: "secret-ref"` > - At the same time, Paperclip already has a first-class secrets store, and `SecretBindingPicker` is the canonical UI for binding to one of those stored secrets > - But `JsonSchemaForm`'s `SecretField` rendered only a plain password input, so configuring an E2B (or Modal / Cloudflare / Daytona) sandbox required leaving the form, copying a secret UUID, and pasting it back > - This pull request wires `SecretBindingPicker` into `SecretField` so every plugin secret-ref field gets the picker plus an optional raw-value fallback > - The benefit is that secret reuse becomes one click instead of a tab switch, and the raw-paste path still works for one-off keys or long SSH-style secrets ## What Changed - `ui/src/components/JsonSchemaForm.tsx` `SecretField` now renders `SecretBindingPicker` above the existing password/textarea input. UUID-shaped values are treated as bound refs (no raw input shown). Non-UUID values keep the password/textarea visible (auto-opened) for SSH keys and other long secrets. Empty fields show the picker plus a small "Or paste a raw value" toggle. - Selecting a secret writes the secret UUID to the form value — the server-side resolution in `server/src/services/environment-config.ts` (`resolveConfigSecretRefsForRuntime` / `collectEnvironmentSecretRefs`) is unchanged. The version selector on the picker is suppressed (`allowVersionSelector={false}`) because plugin secret refs always resolve at `"latest"`. - `ui/src/components/JsonSchemaForm.test.tsx` mocks the picker (which requires `CompanyContext` + `QueryClient` providers) and adds coverage for: picker render, UUID-bound state hides the raw input, picker selection writes the UUID through `onChange`, raw text keeps the password fallback. The original multiline (SSH key) case still asserts a textarea + no password input. ## Verification - `pnpm --filter @paperclipai/ui test src/components/JsonSchemaForm.test.tsx` → 4/4 passing - `pnpm --filter @paperclipai/ui test src/pages/PluginSettings.test.tsx` → 5/5 passing (existing consumer of `JsonSchemaForm`) - `pnpm --filter @paperclipai/ui exec tsc --noEmit` → clean - Manual: in the company Environments page, edit an environment with a sandbox driver that exposes a `secret-ref` field (e.g., E2B `apiKey`). The field should render the secret dropdown above the raw-value toggle; selecting an active secret persists its UUID, and saving the form continues to resolve the secret at runtime. Before/after screenshots: deferred — change was validated by [@devinfoley](https://github.com/devinfoley) on the main Paperclip instance before this PR was opened. Happy to add screenshots if a reviewer wants them. ## Risks - Low risk. The change is additive in the SecretField: the raw-value password/textarea path is preserved and auto-opens whenever the stored value is not a UUID, so existing SSH-key entries and unsaved raw values are untouched. - The new heuristic is "if `value` is a UUID, treat it as a bound secret". A user who somehow pasted a UUID as a literal value (not as a secret ref) would now see it rendered as a bound (possibly missing) secret in the picker. The previous UI already treated UUID values as opaque secret refs at save time (server converts UUIDs straight through), so the runtime behavior is unchanged. - Picker pulls company secrets via the existing `secretsApi.list` query. No new endpoints, no migrations. ## Model Used - Provider: Anthropic - Model: Claude Opus 4.7 (`claude-opus-4-7`) - Capabilities: tool use, extended reasoning - Surfaced through: Claude Code via Paperclip heartbeat (issue PAPA-377) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots — deferred; user validated locally before opening the PR. Will add if requested. - [x] I have updated relevant documentation to reflect my changes (no docs needed — internal behavior of an existing form field) - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing>
- New skill: github-repo-reader — fetch agent defs from GitHub repos - New skill: agent-format-converter — convert external format to Paperclip schema - Update paperclip-create-agent skill with GitHub import workflow - Enables CTO to import agents from agency-agents repo Closes OpenScanAI#3
- DB migration: agent_imports table (0087_agent_imports.sql) - Script: github-repo-reader.ts — fetches 43 agents from agency-agents repo - Script: agent-format-converter.ts — converts external format to Paperclip schema - Script: import-agents.ts — full workflow orchestration - Skills: github-repo-reader + agent-format-converter SKILL.md - Update: paperclip-create-agent with GitHub import workflow - Tested: Successfully imports from https://github.com/msitarzewski/agency-agents - Env config: GITHUB_TOKEN, TELEGRAM_BOT_TOKEN, TELEGRAM_CHAT_ID Closes OpenScanAI#3
…results - Added valid roles: ceo, cto, cmo, cfo, security, engineer, designer, pm, qa, devops, researcher, general - Added valid icons: bot, cpu, brain, zap, rocket, code, terminal, shield, eye, search, wrench, hammer, lightbulb, sparkles, star, heart, flame, bug, cog, database, globe, lock, mail, message-square, file-code, git-branch, package, puzzle, target, wand, atom, circuit-board, radar, swords, telescope, microscope, crown, gem, hexagon, pentagon, fingerprint - Tested agent creation API: SUCCESS (agent created and deleted) - Tested Telegram notification: SUCCESS (mock test passed) - Verified CTO has can_create_agents permission Part of OpenScanAI#3
Usage: ./bin/import-agents <github-repo-url> [--dry-run] [--company-id <id>] Part of OpenScanAI#3
…s collaboration - New script: scripts/hermes-bridge.ts — Polls GitHub issues labeled 'hermes-execution' - New skill: skills/hermes-executor/SKILL.md — Documentation for Hermes execution - Update: skills/paperclip-create-agent/SKILL.md — Added Hermes execution labeling step - New service: systemd hermes-bridge.service for background polling - Env config: BRIDGE_LABEL, BRIDGE_POLL_INTERVAL, BRIDGE_STATE_FILE - Features: - Polls GitHub for issues with hermes-execution label - Posts IN_PROGRESS/DONE/FAILED status comments - Updates issue labels (removes hermes-execution, adds hermes-done) - Sends Telegram notifications to user - Maintains state file to prevent duplicate execution - Supports multi-project (multiple bridge instances) Usage: npx tsx scripts/hermes-bridge.ts --repo OpenScanAI/xShorts.News --once npx tsx scripts/hermes-bridge.ts --repo OpenScanAI/xShorts.News --poll systemctl --user start hermes-bridge Closes OpenScanAI#7
…ip-Hermes collaboration" This reverts commit e23c1ad.
…XDC SkyNet, DICOMPUTE, and GoCloudX
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Jun 17, 2026
…-agents-from-list-and-org fix: exclude terminated agents from list and org chart endpoints
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Overview
Complete system for importing external agents from GitHub repositories into Paperclip/Levi. Closes #3.
What Changed
1. Database Migration
packages/db/src/migrations/0087_agent_imports.sqlagent_importstable with tracking for source, status, results2. Executable Scripts
scripts/github-repo-reader.ts— Fetches agent definitions from any public GitHub reposcripts/agent-format-converter.ts— Converts external format to Paperclip native schemascripts/import-agents.ts— Full workflow orchestrationbin/import-agents— One-command CLI wrapper./bin/import-agents <github-repo-url> [--dry-run]3. Agent Skills
skills/github-repo-reader/SKILL.md— Skill documentation for repo readingskills/agent-format-converter/SKILL.md— Skill documentation for format conversionskills/import-agents/SKILL.md— Skill documentation for full import workflow4. Testing
tests/import-agents.test.ts— End-to-end test suiteHow to Test
Division of Responsibilities
Checklist
See also: PR #9 (Issue #7 — Two Friends Model / Hermes Bridge)