Refactor module boundaries and add Dependency Cruiser checks

[Pantani]

Summary

• Adds Dependency Cruiser-based architectural validation for the Rust module graph
• Introduces a Rust-to-shadow-graph adapter and rule set for circular and forbidden dependencies
• Refactors shared boundaries to remove the detected cycles without changing business behavior
• Documents the validation workflow and discovered layers in the repo docs

Testing

• cargo test passed
• cargo check --no-default-features passed
• cargo clippy -- -D warnings passed
• cargo clippy --no-default-features -- -D warnings passed
• npm run arch:deps passed

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ℹ️ Review info

⚙️ Run configuration

Configuration used: Organization UI

Review profile: ASSERTIVE

Plan: Pro

Run ID: b7149167-4a40-4f7a-8cfd-8688327b5db5

📥 Commits

Reviewing files that changed from the base of the PR and between ad91c74 and d7dd182.

⛔ Files ignored due to path filters (1)

• package-lock.json is excluded by !**/package-lock.json

📒 Files selected for processing (42)

• .dependency-cruiser.cjs
• .gitignore
• README.md
• docs/reference/dependency-analysis.md
• docs/site/src/concepts/architecture.md
• package.json
• scripts/dependency-cruiser-rust-adapter.mjs
• src/bootstrap.rs
• src/cli/chain.rs
• src/cli/doctor.rs
• src/cli/generate.rs
• src/cli/onboarding.rs
• src/codegen/codama.rs
• src/codegen/mod.rs
• src/config/migrations/mod.rs
• src/config/migrations/v0_to_v1.rs
• src/config/migrator.rs
• src/config/mod.rs
• src/lib.rs
• src/onboarding/args.rs
• src/onboarding/deploy.rs
• src/onboarding/examples.rs
• src/onboarding/learn.rs
• src/onboarding/mod.rs
• src/onboarding/recipes/mod.rs
• src/onboarding/wallet.rs
• src/onboarding/wizard.rs
• src/process.rs
• src/runtime/pipeline.rs
• src/runtime/serve.rs
• src/runtime/subprocess.rs
• src/runtime/supervisor.rs
• src/runtime/surfpool.rs
• src/runtime/testvalidator.rs
• src/runtime/validator.rs
• src/runtime/watcher.rs
• src/toolchain/fix.rs
• tests/runtime_pipeline.rs
• tests/runtime_serve_loop.rs
• tests/runtime_subprocess.rs
• tests/runtime_validator.rs
• tests/runtime_watch_loop.rs

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[ecc-tools]

ECC bundle files are already tracked in this repository. Skipping generation of another bundle PR.

[ecc-tools]

ECC bundle files are already tracked in this repository. Skipping generation of another bundle PR.