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Fix scan/get --json dropping apply failures (#424) - #955

Merged

Mikola Lysenko (mikolalysenko) merged 7 commits into

mainfrom

agent/fix-nested-apply-json-failures

Oct 7, 2026

Commits on Oct 6, 2026
- Start fix for #424
  Claude (claude)
  committed
  f18c7ee
- Add failing tests for apply failures in --json
  Claude (claude)
  committed
  9951d28
- Report apply failures in scan/get --json
  Claude (claude)
  committed
  94c993c
- Keep uninstalled patches as warnings in --json
  Claude (claude)
  committed
  d2e44f3
- Check composer/gem docker sync via the manifest
  Claude (claude)
  committed
  a3148d5
- Count only patches apply really applied
  Claude (claude)
  committed
  9df5fab
- Add the Gradle and Maven inline digests to the pending list
  Claude (claude)
  committed
  c51938b