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Stable sample identity across search outputs
- #147
#147
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jspaezp
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Stable sample identity across search outputs
#147
jspaezp
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TalusBio/timsbuktoolkit:feat/a1-sample-identity
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Commits on Sep 18, 2026
Use stable location-derived sample identities for search outputs
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Refresh PSI-MS vocabulary and clarify overwrite reruns
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Require sample identity when constructing result writers
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Commits on Sep 22, 2026
Clarify result writer modes and normalize suffix case
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Delegate canonical sample naming to raw reader registry
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Trim sample identity documentation to usage essentials
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Reuse selected raw reader for sample naming and loading
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