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Add an indexed regional-access arm for the retrieval comparison - #23

Merged

ecrum19 merged 9 commits into

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feature/regional-access

Sep 25, 2026

Commits on Sep 24, 2026

Add an indexed regional-access arm for the retrieval comparison

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cd589ea
Test the regional runner's driver, index preparation and failure paths

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eba4371
Sort an unsorted VCF before indexing it for the regional arms

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c3815a4
Hand the SPARQL arms N-Triples, the engine options they read, and isolation

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0ca2ff6
Decompress plain-gzip VCFs before bgzip; report tool failures cleanly

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6ecd528
Time slow SPARQL engines on sampled windows, like the scan arm

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325e348
Correct the stated cost of the SPARQL engines on regional questions

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8ba2a4f
Keep the regional runner's tests out of the CI suite

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c0b07d8
Say in the docs that the regional runner is a standalone investigation

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e13f974