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@integrativebioinformatics

Integrative Bioinformatics

Laboratory of Integrative Bioinformatics

Laboratory of Integrative Bioinformatics (LIB)

Universidad de Chile

Faculdad de Ciéncias Químicas y Farmacéuticas (FaCiQyF)

Unidad de Genómica Avanzada (UGA)

The Laboratory of Integrative Bioinformatics, led by Dr. Vinicius Maracaja-Coutinho, focuses on the development and application of computational methods to study complex biological systems.

Research Areas

  • Transcriptional & Genomic Complexity: Investigating the intricate architecture of genomes and the dynamic nature of the transcriptome across different biological contexts.
  • Systems Biology: Multi-omics integration and gene co-expression network analysis.
  • Bioinformatics Tools: Development of open-source software for genomic and transcriptomic data processing.
  • Precision Medicine: Genomic studies focused on Latin American populations.

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  1. longnoncoder longnoncoder Public

    A pipeline for isoform-level transcriptome assembly and lncRNA discovery from long-reads

    Nextflow 1

  2. scNotebooks scNotebooks Public

    This repository contains scNotebooks, a collection of interactive Jupyter and Google Colab notebooks designed to teach and practice single‑cell and spatial transcriptomics. The notebooks guide lear…

    Jupyter Notebook 10 2

  3. EBI-lrRNAseq-2026 EBI-lrRNAseq-2026 Public

    EBML-EBI Long-read RNA-seq Course 2026

    HTML 2

Repositories

Showing 10 of 11 repositories

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