ci: bump some ci dependencies versions and fix makefile commands

[mdevolde]

ci: bump some ci dependencies versions and fix makefile commands

Why the pull request was made

To keep up to date the ci dependencies (mypy, ruff, actions in the tests workflow).
The actions in the yml workflow are now fixed (good practice to avoid supply chains cause of auto update when a malicious "bug-fix version" is published by one of these dependencies).

Summary of changes

• Fix "check" command in the Makefile to target only relevant directories
• Bump ruff and mypy versions
• Bump CI dependencies and fix the "actions" versions

Screenshots (if appropriate):

Not applicable.

How has this been tested?

Applied the tests, ran the Makefile commands to ensure that everything works.

Resources

Not applicable.

Types of changes

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to not work as expected)
• Documentation update (changes to documentation only)
• Refactor / code style update (non-breaking change that improves code structure or readability)
• Tests / CI improvement (adding or updating tests or CI configuration only)
• Other (please describe):

Checklist

• Followed the project's contributing guidelines.
• Updated any relevant tests.
• Updated any relevant documentation.
• Added comments to your code where necessary.
• Formatted your code, run the linters, checked types and tests.