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Remove system deps from workflow and update R #392

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Merged
NeuroShepherd merged 2 commits into from
May 12, 2026
Merged

Remove system deps from workflow and update R #392

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93b884d
Update R version and use any package version for ggplot and plotly
NeuroShepherd May 12, 2026
be6b9c4
Remove system dep install step
NeuroShepherd May 12, 2026
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12 changes: 4 additions & 8 deletions .github/workflows/publish.yml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
on:
workflow_dispatch:
push:
branches: main
branches: [main]

name: Quarto Publish

Expand All @@ -14,17 +14,13 @@ jobs:
- name: Check out repository
uses: actions/checkout@v4

- name: Install libcurl
run: |
sudo apt-get install libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libcurl4-openssl-dev

- name: Set up Quarto
uses: quarto-dev/quarto-actions/setup@v2

- name: Install R
uses: r-lib/actions/setup-r@v2
with:
r-version: '4.4.0'
r-version: '4.5.3'

- name: Install R Packages
uses: r-lib/actions/setup-r-dependencies@v2
Expand All @@ -33,8 +29,8 @@ jobs:
packages: |
any::rmarkdown
any::dplyr
ggplot2@3.5.1
plotly@4.10.4
any::ggplot2
any::plotly
any::sessioninfo

- name: Render and Publish
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