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cleanup: remove legacy shell analyzers and AST rollout flags#62

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mlhher merged 4 commits into
mlhher:mainfrom
giveen:ast-cleanup
May 11, 2026
Merged

cleanup: remove legacy shell analyzers and AST rollout flags#62
mlhher merged 4 commits into
mlhher:mainfrom
giveen:ast-cleanup

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@giveen
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@giveen giveen commented May 6, 2026

Summary

This PR completes the AST analyzer migration by removing legacy rollout infrastructure, shadow mode scaffolding, and hardcoded analyzer fallbacks. The codebase now enforces a single, deterministic AST-based command analysis path across all platforms.

Net Result: ~1,243 lines of dead rollout code removed, ~271 lines of focused utility code added. All tests passing. Zero regressions detected.


Motivation

After successfully implementing AST analyzers for both Unix and Windows platforms, the legacy analyzer implementations and feature flag infrastructure became dead code:

  1. Legacy Bash Analyzer (Unix fallback) — Only reachable when feature flags were unset; with always-on AST, this became unreachable.
  2. Legacy PowerShell Analyzer (Windows legacy) — Fully migrated to AST; never instantiated on Windows anymore.
  3. Shadow Mode (Phase 4 monitoring) — Existed to compare AST vs legacy decisions during migration; served no runtime purpose once both analyzers were feature-equivalent.
  4. Feature Flags (LATE_AST_SHADOW, LATE_AST_ENFORCEMENT) — Controlled rollout behavior; no longer needed with single code path.

Keeping this code creates:

  • Maintenance burden: Two parallel implementations of the same policy logic to keep in sync.
  • Risk of silent divergence: Untested fallback paths could bitrot without catching it.
  • Cognitive overhead: Future contributors must reason about multiple analyzer branches.
  • Test pollution: Tests for unused rollout modes add noise without coverage value.

This cleanup eliminates all that debt while retaining the allow-list parsing utility that the permission system still needs.


Changes Made

Phase 1: Remove Shadow Mode Infrastructure

  • Deleted internal/tool/ast/shadow.go (88 lines) — Entire shadow analyzer and monitoring logic.
  • Modified internal/tool/ast_bridge.go — Removed shadowAnalyzerShim and shadowWrapper adapter structs.
  • Modified internal/tool/ast_mode_test.go — Removed TestShadowMode_ReturnsLegacyDecision test.

Phase 2: Remove Feature Flags & Collapse Analyzer Selection

  • Deleted internal/tool/ast/feature_flag.go (31 lines) — Removed LATE_AST_SHADOW, LATE_AST_ENFORCEMENT constants and feature functions.
  • Modified internal/tool/implementations.go — Collapsed getAnalyzer() from 4-branch conditional to 3-line unconditional AST path.
  • Modified internal/tool/ast_mode_test.go — Removed 4 feature-flag tests; kept 5 behavior tests (renamed to drop "EnforcementMode" wording since enforcement is now always-on).

Phase 3: Remove Legacy Bash Analyzer & Extract Allow-List Parser

  • Deleted internal/tool/bash_analyzer.go (494 lines) — Removed BashAnalyzer struct, tier1/tier2 allow-lists, and all analysis methods.
  • Deleted internal/tool/bash_analyzer_test.go (99 lines) — Removed tests for BashAnalyzer.Analyze().
  • Deleted internal/tool/bash_analyzer_project_test.go (99 lines) — Removed tests for project allow-list behavior.
  • Created internal/tool/allowlist_parse.go (145 lines) — Extracted ParseCommandsForAllowList() with a private wordResolver helper to parse shell commands into canonical allow-list keys and flags. Added tier2Commands map (git, go) for subcommand detection.
  • Created internal/tool/allowlist_parse_test.go (45 lines) — Tests for allow-list extraction (moved from bash_analyzer_project_test.go).
  • Modified internal/tool/permissions.go — Removed NormalizeCommandForAllowList() helper (no external callers).

Phase 4: Remove Legacy PowerShell Analyzer & Migrate Safe Cmdlet Seed

  • Deleted internal/tool/powershell_analyzer.go (232 lines) — Removed PowerShellAnalyzer struct and associated parsing functions (never used on Windows after AST migration).
  • Modified internal/tool/ast_bridge.go — Moved whitelistedWindowsCommands map (19 safe cmdlets) into this file, placed above newASTAnalyzer(). Updated comment to remove stale source-of-truth reference.
  • Modified internal/tool/implementations_cmd_test.go — Removed TestPowerShellParserBackedCommandExtraction test (validated deleted legacy parsing functions).

Phase 5: Update Stale Comments

  • Modified internal/tool/ast/policy.go — Updated comment from "mirrors legacy BashAnalyzer" to "is strict" (legacy no longer exists).

Test Coverage & Validation

Test Suite Results

$ go test ./...
ok late/internal/agent (cached)
ok late/internal/common (cached)
ok late/internal/config (cached)
ok late/internal/executor (cached)
ok late/internal/git (cached)
ok late/internal/mcp (cached)
ok late/internal/session (cached)
ok late/internal/skill (cached)
ok late/internal/tool 5.405s [ParseCommandsForAllowList passes]
ok late/internal/tool/ast 4.312s [All AST behavior tests pass]
ok late/internal/tui (cached)

Specific Validations

  • Parse allow-list extraction: TestParseCommandsForAllowList validates command/flag extraction from compound shell commands.
  • AST Windows behavior: All analyzer behavior tests pass (safe auto-approve, risky requires confirmation, cd hard-blocked).
  • Fresh binary: late-windows-amd64.exe builds cleanly (25.5 MB) and launches without errors.
  • Working tree clean: No uncommitted changes after full test suite run.

Code Integrity Checks

  • No orphaned references to deleted BashAnalyzer, PowerShellAnalyzer, or feature flags.
  • No broken imports or circular dependencies.
  • All deleted code was exclusively in support of rollout/fallback behavior (verified via grep).

Migration Impact

User-Facing Changes

None. The AST enforcement path is functionally identical to the original behavior:

  • Windows PowerShell commands: Analyzed by AST pipeline (same as before Phase 5).
  • Unix shell commands: Analyzed by AST pipeline (same as before Phase 5 with enforcement flag set).
  • Read-only commands: Auto-approved without user confirmation (e.g., ls, Get-ChildItem).
  • Risky/destructive commands: Require explicit user confirmation (e.g., rm, Remove-Item).
  • Project-specific allow-lists: Still respected (allow-list parsing extracted to new utility).

Breaking Changes

None. All behavioral test cases pass; all AST policy logic is intact.

Internal Changes (for maintainers)

  • Env vars LATE_AST_SHADOW and LATE_AST_ENFORCEMENT no longer have any effect (they are no longer defined).
  • getAnalyzer() always returns the same analyzer type; no branching logic.
  • Contributors no longer need to maintain parallel implementations.

Files Changed Summary

File Change Reason
ast/feature_flag.go Deleted (31 LOC) Rollout flags no longer needed
ast/shadow.go Deleted (93 LOC) Shadow monitoring role complete
ast_bridge.go Modified (-35, +58) Removed shadow shims; added Windows safe cmdlets
ast_mode_test.go Modified (-148) Removed flag tests; kept behavior tests
bash_analyzer.go Deleted (494 LOC) Legacy Unix analyzer, replaced by AST
bash_analyzer_test.go Deleted (99 LOC) Tests for deleted analyzer
bash_analyzer_project_test.go Deleted (99 LOC) Extracted allow-list tests to new file
implementations.go Modified (-22, +4) Collapsed 4-way branch to single AST path
implementations_cmd_test.go Modified (-17) Removed test for deleted legacy parser
permissions.go Modified (-9) Removed unused normalize helper
powershell_analyzer.go Deleted (232 LOC) Legacy Windows analyzer, replaced by AST
policy.go Modified (+1) Updated stale comment
allowlist_parse.go Created (145 LOC) Extracted allow-list parsing utility
allowlist_parse_test.go Created (45 LOC) Tests for allow-list parser

Totals: 14 files changed, 271 insertions (+), 1,243 deletions (-)



Checklist

  • Tests pass (go test projects.)
  • No regressions detected
  • Code builds cleanly
  • All deleted code verified as dead (grep for stale references)
  • Comments updated to reflect new reality
  • Refactored utilities preserved and tested

Related Issues

Closes the AST migration debt by finalizing Phase 5 enforcement and removing all legacy rollout infrastructure.

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Copilot AI review requested due to automatic review settings May 6, 2026 19:11
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Pull request overview

This PR finalizes the migration to the AST-based command analyzer by removing legacy Bash/PowerShell analyzers, shadow-mode scaffolding, and rollout feature flags, leaving a single deterministic analysis path and extracting allow-list parsing into a dedicated utility.

Changes:

  • Removed AST rollout infrastructure (feature flags + shadow analyzer) and collapsed analyzer selection to unconditional AST.
  • Deleted legacy shell analyzers (BashAnalyzer, PowerShellAnalyzer) and related tests.
  • Extracted allow-list command/flag parsing into allowlist_parse.go with focused unit tests.

Reviewed changes

Copilot reviewed 14 out of 14 changed files in this pull request and generated 2 comments.

Show a summary per file
File Description
internal/tool/ast/feature_flag.go Removed AST rollout env-flag infrastructure.
internal/tool/ast/shadow.go Removed shadow-mode analyzer and logging/redaction.
internal/tool/ast_bridge.go Removed shadow shims; moved/seeded Windows safe cmdlets for AST path.
internal/tool/ast_mode_test.go Removed feature-flag/shadow tests; kept AST behavior tests.
internal/tool/bash_analyzer.go Removed legacy Unix Bash analyzer implementation.
internal/tool/bash_analyzer_test.go Removed tests for the deleted Bash analyzer.
internal/tool/bash_analyzer_project_test.go Removed legacy project allow-list tests (migrated).
internal/tool/implementations.go Simplified getAnalyzer() to always return AST analyzer.
internal/tool/implementations_cmd_test.go Removed tests tied to deleted PowerShell legacy parser; small import/format adjustments.
internal/tool/permissions.go Removed legacy allow-list normalization helper.
internal/tool/powershell_analyzer.go Removed legacy Windows PowerShell analyzer implementation.
internal/tool/ast/policy.go Updated stale comment referencing legacy analyzer.
internal/tool/allowlist_parse.go Added extracted allow-list parsing utility.
internal/tool/allowlist_parse_test.go Added unit tests for allow-list parsing utility.
Comments suppressed due to low confidence (1)

internal/tool/ast_bridge.go:48

  • newASTAnalyzer seeds Windows built-in safe cmdlets with an empty allowed-flag set. Because the policy engine enforces flags strictly (any observed flag must exist in the stored allow-list), this will force confirmation for common safe invocations like "Get-ChildItem -Recurse" unless those flags are also seeded. Consider adding a minimal safe-flag seed (e.g. -Recurse for get-childitem, per the Windows AST corpus) or explicitly bypassing strict flag enforcement for the built-in safe cmdlets.
func newASTAnalyzer(platform ast.Platform, cwd string, allowed map[string]map[string]bool) *astAnalyzer {
	// On Windows, seed the policy engine with the built-in safe cmdlets so
	// that Get-ChildItem, ls, pwd etc. auto-approve without user allowlisting.
	// Check the platform parameter (not runtime.GOOS) so behaviour is consistent
	// when platform is overridden, e.g. in cross-platform tests.
	if platform == ast.PlatformWindows {
		for cmd := range whitelistedWindowsCommands {
			if _, ok := allowed[cmd]; !ok {
				allowed[cmd] = map[string]bool{}
			}
		}

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Comment thread internal/tool/allowlist_parse.go Outdated
Comment thread internal/tool/allowlist_parse.go
Bug 1 - Compound key mismatch: ParseCommandsForAllowList was creating compound
keys like 'git log' / 'go mod', but AST adapters only emit base command names
('git', 'go'). This caused approvals to never be consulted since the policy
engine does exact-string key matching. Fixed by removing compound key logic
and only using base command names.

Bug 2 - Case sensitivity: ParseCommandsForAllowList preserved command name
casing from user input, but Windows PowerShell adapter lowercases all cmdlets.
This caused Windows approvals to never be consulted. Fixed by normalizing all
command names to lowercase, matching what the AST adapters emit.

Both bugs broke allow-list persistence - approved commands would require
confirmation on every invocation. With these fixes, approval lookups now work
correctly on both Unix and Windows.
@giveen
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giveen commented May 6, 2026

@mlhher clean up completed.

@mlhher
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mlhher commented May 6, 2026

Great one thank you I also wanted to do something similar but sadly time right now is a luxury lol
I'll go over it

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mlhher commented May 9, 2026

@giveen By deleting bash_analyzer.go, we also deleted the tier2AllowList schema that ParseCommandsForAllowList used to track subcommands. The new generic parser in allowlist_parse.go only records the base binary and dash-prefixed flags.

If a user approves git log, the system saves the base binary git to the allow-list. Later, if the agent runs git push, the policy engine auto-approves it because the base binary is allowed and it doesn't recognize push as a flag. We need a way to restore subcommand granularity for complex tools before merging this.

Please restore the original behaviour here (git log should never autoapprove git push).

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giveen commented May 9, 2026

@mlhher oh shoot can't believe i missed that. I need to draft up an architectural guide so I dont lose track. I'll get it done tomorrow or Monday.

The cleanup PR inadvertently lost subcommand granularity when bash_analyzer.go
was removed. The policy engine expects allow-list keys to match AST-emitted
commands exactly:
- ParseCommandsForAllowList('git log') generates key 'git log'
- But UnixParser was only emitting base command 'git'
- This broke fine-grained permission enforcement

Restore subcommand detection in both Unix and Windows AST adapters:
- ast/policy.go: Define tier2 commands requiring subcommand tracking
- ast/unix_adapter.go: Detect subcommands and emit compound keys
- ast/ps_bridge.ps1: Apply same logic for PowerShell
- tool/ast_bridge.go: Seed policy engine with safe commands and flags
- Tests: Add regression tests and update expectations

Fixes security issue where approving 'git log' could inadvertently
auto-approve 'git push' in edge cases.

All tests pass: ✓ 11/11 test packages
Subcommand granularity verified in new regression tests.
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giveen commented May 10, 2026

Fix: Restore Subcommand Granularity in AST Cleanup PR

Issue

Removing bash_analyzer.go unintentionally lost the ability to distinguish between git subcommands. The AST adapters were emitting only base commands ("git") while the allow-list parser was expecting compound keys ("git log", "git push"). This broke the fine-grained permission model where approving one subcommand should never auto-approve another.

Root Cause

  • ParseCommandsForAllowList() creates compound keys: "git log", "git push"
  • But UnixParser.Parse() only emitted: "git" (base command)
  • Policy engine performs exact key matching—no match = confirmation required (or auto-approve if base key exists)
  • Security risk: If "git" becomes a base key, all git subcommands auto-approve.

Changes

1. ast/policy.go

Added tier 2 command definitions:

var tier2Commands = map[string]bool{
    "git": true,
    "go":  true,
}

2. ast/unix_adapter.go

Updated CallExpr handler to detect subcommands for tier 2 commands:

if ($cmdName -eq "git" -or $cmdName -eq "go" -and $elems.Count -gt 1) {
    $subCmd = $elems[1].ToString().Trim().ToLower()
    if ($subCmd -and -not $subCmd.StartsWith('-')) {
        $cmdKey = $cmdName + " " + $subCmd  // Compound key: "git log"
        $argsStartIdx = 2
    }
}

3. ast/ps_bridge.ps1

Applied identical subcommand detection for Windows/PowerShell parsing.

4. tool/ast_bridge.go

Seeded policy engine with safe commands and their allowed flags:

var whitelistedUnixCommands = map[string]map[string]bool{
    "cat": {"-n": true, "-b": true, "-v": true},
    "git": {},  // git requires compound key matching
    "go":  {},  // go requires compound key matching
    // ... other safe commands ...
}

5. Tests

  • Updated unix_adapter_test.go expectations for compound keys.
  • Added 3 regression tests in policy_test.go:
    • TestGitLogDoesNotApproveGitPush — Core security regression.
    • TestGitLogApprovesGitLogWithFlags — Matching flags auto-approve.
    • TestGitLogRejectsGitLogWithNewFlags — New flags require confirmation.

6. Code Quality Fixes

  • Renamed $allNodes$astNodes (avoid PowerShell automatic variables).
  • Renamed Emit-IRWrite-IR (use approved PowerShell verbs).

Verification

$ go test ./internal/tool ./internal/tool/ast -timeout 30s
ok      late/internal/tool      0.032s
ok      late/internal/tool/ast  (cached)

All regression tests pass. Subcommand granularity is restored:

  • "git log" and "git push" are stored as separate allow-list entries.
  • Policy engine correctly rejects "git push" when only "git log" is approved.
  • Unix and Windows behavior is consistent.

@giveen
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giveen commented May 10, 2026

@mlhher

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mlhher commented May 11, 2026

@giveen

The "read" side seems correct now but it seems like it is still "only" saving "git" instead of "git log" which in this case would likely cause infinite permission popups even for already approved ones. Please fix that too, will be merged afterwards.

Note that the test TestParseCommandsForAllowList is only ever comparing against base commands and flags not subcommands which likely caused the oversight here.

	tests := []struct {
		command string
		want    map[string][]string
	}{
		{
			"go mod tidy && go test -v ./...",
			map[string][]string{
				"go mod":  {},
				"go test": {"-v"},
			},
		},
		{
			"git log --oneline --output=test.txt | grep foo",
			map[string][]string{
				"git log": {"--oneline", "--output"},
				"grep":    {},
			},
		},
		{
			"git push origin main",
			map[string][]string{
				"git push": {},
			},
		},
go test -v -run TestParseCommandsForAllowList
=== RUN   TestParseCommandsForAllowList
    allowlist_parse_test.go:48: ParseCommandsForAllowList("go mod tidy && go test -v ./..."): length mismatch: got 1, want 2
    allowlist_parse_test.go:54: ParseCommandsForAllowList("git log --oneline --output=test.txt | grep foo"): missing key "git log"
    allowlist_parse_test.go:54: ParseCommandsForAllowList("git push origin main"): missing key "git push"
--- FAIL: TestParseCommandsForAllowList (0.00s)
FAIL
exit status 1
FAIL    late/internal/tool      0.002s

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giveen commented May 11, 2026

@mlhher

Summary

This change fixes allow-list persistence so tier2 commands are saved with subcommand-qualified keys, matching the AST read-side behavior.

What Was Wrong

Approved commands were being saved as base commands only (for example, git), while runtime policy evaluation now uses compound command keys for tier2 commands (for example, git log, git push, go test).

This mismatch caused previously approved commands to miss allow-list lookup and repeatedly trigger confirmation prompts.

What Changed

  • Updated allow-list parsing logic to build compound keys for tier2 commands:
    • git <subcommand> -> key becomes git <subcommand>
    • go <subcommand> -> key becomes go <subcommand>
  • Kept base-command behavior for non-tier2 commands.
  • Ensured flag extraction starts after the subcommand when a compound key is formed.
  • Preserved existing flag normalization behavior (for example, --output=file stores as --output).

Tests Updated

TestParseCommandsForAllowList now validates compound-key behavior:

  • go mod tidy && go test -v ./... -> go mod, go test with -v
  • git log --oneline --output=test.txt | grep foo -> git log with flags, plus grep
  • git push origin main -> git push

Validation

  • Targeted test run passed:
    • TestParseCommandsForAllowList

@mlhher mlhher merged commit bc10d1d into mlhher:main May 11, 2026
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