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105 changes: 105 additions & 0 deletions .github/workflows/build-edt.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,105 @@
# SPDX-FileCopyrightText: 2026 The RISE Project
# SPDX-License-Identifier: MIT
---
# Based on: https://github.com/seung-lab/euclidean-distance-transform-3d/blob/3.1.2/.github/workflows/build_wheels.yml
name: Build edt wheels (riscv64)

on:
workflow_dispatch:
inputs:
version:
description: 'edt version to build (git tag, e.g. 3.1.2)'
required: true
default: '3.1.2'
pull_request:
paths:
- '.github/workflows/build-edt.yml'
- 'patches/edt/**'

concurrency:
group: ${{ github.workflow }}-${{ inputs.version || '3.1.2' }}-${{ github.head_ref || github.run_id }}
cancel-in-progress: true

permissions:
contents: read # to fetch code (actions/checkout)

env:
EDT_VERSION: ${{ inputs.version || '3.1.2' }}
MANYLINUX_RISCV64_IMAGE: quay.io/pypa/manylinux_2_39_riscv64

jobs:
setup:
uses: $/.github/workflows/_setup.yml

build_wheels:
needs: [setup]
name: Build edt ${{ inputs.version || '3.1.2' }} ${{ matrix.python }}-manylinux_riscv64
runs-on: ubuntu-24.04-riscv
timeout-minutes: 60
strategy:
fail-fast: false
matrix:
python: ["cp312", "cp313", "cp314", "cp314t"]

steps:
- name: Checkout edt ${{ env.EDT_VERSION }}
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
repository: seung-lab/euclidean-distance-transform-3d
ref: ${{ env.EDT_VERSION }}
persist-credentials: false

- name: Checkout python-wheels
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
path: python-wheels
persist-credentials: false

- name: Apply patches
run: git apply python-wheels/patches/edt/${{ env.EDT_VERSION }}/*.patch

- uses: pypa/cibuildwheel@1828c10ab37f080699c7b81cea34097c684a7074 # v4.2.0
with:
output-dir: wheelhouse/
only: ${{ matrix.python }}-manylinux_riscv64
env:
CIBW_MANYLINUX_RISCV64_IMAGE: ${{ env.MANYLINUX_RISCV64_IMAGE }}
# numpy is a build-time requirement (headers, via pyproject.toml's
# build-system.requires) and, despite not being declared as a
# runtime dependency by name, an implicit one too (the compiled
# extension calls numpy's C API at import time). Only our registry
# has it for riscv64; only-binary keeps a newer PyPI release from
# winning the resolution and then compiling from sdist.
CIBW_ENVIRONMENT: >-
PIP_EXTRA_INDEX_URL=https://pypi.riseproject.dev/simple/
PIP_ONLY_BINARY=numpy
CIBW_TEST_REQUIRES: pytest numpy scipy
CIBW_TEST_COMMAND: python -m pytest -v {project}/automated_test.py

- name: Check wheel contents
run: |
python3 - wheelhouse/*.whl <<'EOF'
import sys, zipfile
names = zipfile.ZipFile(sys.argv[1]).namelist()
exts = {n.split("/")[-1].split(".")[0] for n in names if n.endswith(".so")}
assert exts == {"edt"}, exts
licences = {n.rsplit("/", 1)[-1] for n in names if ".dist-info/licenses/" in n} - {""}
assert licences == {"COPYING", "COPYING.LESSER"}, licences
EOF

- name: Store wheels
uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
with:
name: edt-${{ env.EDT_VERSION }}-${{ matrix.python }}-manylinux_riscv64
path: ./wheelhouse/*.whl
if-no-files-found: error

publish:
name: Publish edt ${{ inputs.version || '3.1.2' }}
needs: [setup, build_wheels]
permissions:
contents: write
pull-requests: write
uses: $/.github/workflows/_publish-wheel.yml
with:
artifact-pattern: edt-${{ inputs.version || '3.1.2' }}-*-manylinux_riscv64
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
From 28d7662d54333ee225c4567fb26a22f7608a8479 Mon Sep 17 00:00:00 2001
From: Ludovic Henry <git@ludovic.dev>
Date: Mon, 7 Sep 2026 16:03:48 +0200
Subject: [PATCH] Ship the LGPL license files in the wheel

setup.cfg names license_files = LICENSE, but the project has no LICENSE
file at the root -- only COPYING (GPLv3 text) and COPYING.LESSER (the
LGPLv3 addendum, per the standard GNU dual-file convention). An explicit
license_files list turns off setuptools' default LICEN[CS]E*/COPYING*
glob, so the mismatch means every published wheel (verified on PyPI's
edt-3.1.2 manylinux wheels) ships no license file at all in
dist-info/licenses/.

Point license_files at the files that actually exist so the wheel
carries the LGPL-3.0-or-later text it declares.

Upstream-Status: To upstream [not yet submitted; same gap exists in every edt wheel on PyPI historically, needs maintainer discussion not a drive-by PR]
---
setup.cfg | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/setup.cfg b/setup.cfg
index 43efb4b..464890d 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -7,7 +7,9 @@ description_file = README.md
author = William Silversmith
author_email = ws9@princeton.edu
home_page = https://github.com/seung-lab/euclidean-distance-transform-3d/
-license_files = LICENSE
+license_files =
+ COPYING
+ COPYING.LESSER
license = LGPL-3.0-or-later
classifier =
Intended Audience :: Developers
--
2.50.1 (Apple Git-155)