add flake8 pre-commit#1689

Merged

ivirshup merged 87 commits into

Mar 18, 2021

Commits on Feb 25, 2021

Commits on Mar 1, 2021

Restore setup.py
flying-sheep
authored

Commits on Mar 15, 2021

rm call of black test (#1690)

Koncopd
authored and
Zethson
committed
Fix print_versions for python<3.8 (#1691)

ivirshup
authored and
Zethson
committed
add codecov so we can have a badge to point to (#1693)

ivirshup
authored and
Zethson
committed
Attempt server-side search (#1672)

ivirshup
authored and
Zethson
committed
Fix paga_path (#1047)

authored and
Zethson
committed
Switch to flit

flying-sheep
authored and
Zethson
committed
add setup.py while leaving it ignored

flying-sheep
authored and
Zethson
committed
Update install instructions

flying-sheep
authored and
Zethson
committed
Circumvent new pip check (see pypa/pip#9628)

flying-sheep
authored and
Zethson
committed
Go back to regular pip (#1702)

authored and
Zethson
committed
codecov comment (#1704)

ivirshup
authored and
Zethson
committed
Use joblib for parallelism in regress_out (#1695)

ivirshup
authored and
Zethson
committed
Add sparsificiation step before sparse-dependent Scrublet calls (#1707)

authored and
Zethson
committed
Fix version on Travis (#1713)

flying-sheep
authored and
Zethson
committed
`sc.metrics` module (add confusion matrix & Geary's C methods) (#915)

ivirshup
authored and
Zethson
committed
Fix clipped images in docs (#1717)

ivirshup
authored and
Zethson
committed
Cleanup normalize_total (#1667)

ivirshup
authored and
Zethson
committed
deprecate scvi (#1703)

authored and
Zethson
committed
updated ecosystem.rst to add triku (#1722)

alexmascension
authored and
Zethson
committed
Minor addition to contributing docs (#1726)

ivirshup
authored and
Zethson
committed
Preserve category order when groupby is a list (#1735)

gokceneraslan
authored and
Zethson
committed
Asymmetrical diverging colormaps and vcenter (#1551)

gokceneraslan
authored and
Zethson
committed
add flake8 pre-commit
Zethson
committed
add E402 to flake8 ignore
Zethson
committed
revert neighbors
Zethson
committed
address review
Zethson
committed
black
Zethson
committed
using self for obs_tidy
Zethson
committed
rebased
Zethson
committed
rebasing
Zethson
committed
rebasing
Zethson
committed
rebasing
Zethson
committed
Merge branch 'master' into feature/flake8
Zethson
authored
add flake8 to dev docs
Zethson
committed
add autopep8 to pre-commits
Zethson
committed
add flake8 ignore docs
Zethson
committed
add exception todos
Zethson
committed
add ignore directories
Zethson
committed
reinstated lambdas
Zethson
committed
fix tests
Zethson
committed
fix tests
Zethson
committed
fix tests
Zethson
committed
fix tests
Zethson
committed
fix tests
Zethson
committed

Commits on Mar 16, 2021

Add E741 to allowed flake8 violations.

Zethson
and
ivirshup
authored
Add F811 flake8 ignore for tests

Zethson
and
ivirshup
authored
Fix mask comparison

Zethson
and
ivirshup
authored
Fix mask comparison

Zethson
and
ivirshup
authored
fix flake8 config file
Zethson
committed
readded autopep8
Zethson
committed
import Literal
Zethson
committed
revert literal import
Zethson
committed
fix scatterplot pca import
Zethson
committed
false comparison & unused vars
Zethson
committed
Add cleaner level determination

Zethson
and
ivirshup
authored
Fix comment formatting

Zethson
and
ivirshup
authored
Add smoother dev documentation

Zethson
and
ivirshup
authored
fix flake8
Zethson
committed
Readd long comment

Zethson
and
ivirshup
authored
Assuming X as array like

Zethson
and
ivirshup
authored
fix flake8
Zethson
committed
fix flake8 config
Zethson
committed
reverted rank_genes
Zethson
committed
fix disp_mean_bin formatting

Zethson
and
ivirshup
authored
fix formatting
Zethson
committed
add final todos
Zethson
committed

Commits on Mar 17, 2021

Commits on Mar 18, 2021

revert paga variable naming
ivirshup
committed