Chromatin accessibility analysis of spaceflight (NASA) mouse brains using ArchR (Master's Thesis Project)
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Jul 2, 2023 - R
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archr
Here are 5 public repositories matching this topic...
Annotated guide for running ArchR single-cell ATAC-seq analysis on a bioHPC cluster, with troubleshooting tips and commentary
bioinformatics tutorial r hpc single-cell scatac-seq archr genomics-analysis chromatin-accessibility
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Apr 21, 2026 - HTML
archR: Identifying promoter sequence architectures de novo using NMF
r scikit-learn discovery r-package nmf unsupervised-machine-learning non-negative-matrix-factorization sequence-architectures promoter-sequence-architectures archr
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Jul 1, 2021 - R
An R/ArchR pipeline for single-cell ATAC-seq analysis, producing accessibility embeddings, visualizations, and a report-style set of results with renv-based environment management.
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Dec 30, 2025 - R
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