Fix CI warnings and CodeCov#3803

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shralex_warnings_2

Commits on May 3, 2026

Resolve DeprecationWarnings, JAX int64 truncation, and fix Codecov
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Fix shape broadcasting and RecursionError by using set_value in GDN cache and distillation trainer
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Resolve Pydantic serializer warning for context_parallel_reorder_strategy
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Suppress external deprecation warnings in pytest.ini
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Revert "Suppress external deprecation warnings in pytest.ini"
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Resolve Module.sow and Variable.value deprecation warnings in MLA and GPT3
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Address native project warnings in attention layers and model creation utils
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