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Pull requests: linum-uqam/linumpy
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fix_illum: pool tiles across Z + darkfield/fit knobs (chain tip = dev)
#125
opened May 20, 2026 by
FIrgolitsch
Contributor
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PSF compensation + focal curvature follow-ups
#124
opened May 20, 2026 by
FIrgolitsch
Contributor
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Depth-resolved attenuation: 4 estimators, Li 2020 default
#123
opened May 20, 2026 by
FIrgolitsch
Contributor
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metrics: split package + stacking decisions hardening
#122
opened May 20, 2026 by
FIrgolitsch
Contributor
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perf: pipeline-wide GPU + scratch optimizations
#120
opened May 20, 2026 by
FIrgolitsch
Contributor
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chore: bump python floor to 3.14, modernize CI/build, ruff FURB sweep
#118
opened May 1, 2026 by
FIrgolitsch
Contributor
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fix(galvo): per-tile detect + threaded column strips + --skip_tiles for manual overrides
#117
opened May 1, 2026 by
FIrgolitsch
Contributor
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feat(n4): GPU-accelerated N4 bias field correction
#116
opened Apr 30, 2026 by
FIrgolitsch
Contributor
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perf: cap PyTorch threads, bump fix_illumination forks, skip intermediate pyramids
#113
opened Apr 30, 2026 by
FIrgolitsch
Contributor
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feat: GPU keep-on-device + kvikio (GDS) reader + pipeline GPU wiring
#112
opened Apr 30, 2026 by
FIrgolitsch
Contributor
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chore: post-rebase refinements and additional diagnostics
#111
opened Apr 28, 2026 by
FIrgolitsch
Contributor
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ci(nextflow): nf-test infrastructure and GitHub Actions workflow
#110
opened Apr 28, 2026 by
FIrgolitsch
Contributor
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feat: updated Nextflow workflows with profiles, auto-assess, rehoming
#108
opened Apr 27, 2026 by
FIrgolitsch
Contributor
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feat: add manual-alignment export, refinement, and global-transform tools
#107
opened Apr 23, 2026 by
FIrgolitsch
Contributor
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feat: add slice-config module and generator CLI
#106
opened Apr 23, 2026 by
FIrgolitsch
Contributor
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feat: Allen atlas improvements and RAS alignment
#101
opened Apr 1, 2026 by
FIrgolitsch
Contributor
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feat: GPU acceleration module and scripts
#99
opened Apr 1, 2026 by
FIrgolitsch
Contributor
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feat: motor stacking, auto-exclude, refined stitching
#98
opened Apr 1, 2026 by
FIrgolitsch
Contributor
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feat: slice interpolation for missing sections (z-morph)
#87
opened Mar 17, 2026 by
FIrgolitsch
Contributor
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Configuring the documentation for Sphinx and ReadTheDocs
#40
opened Dec 17, 2024 by
joe-from-mtl
Contributor
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